Home DatasetsExperiment Details
E-GEOD-9189 GSE9189 transcription profiling by array Mus musculus

Transcription profiling of mouse normal LT-HSC vs ST-HSC

Submitted Sept. 27, 2007 ·Released June 20, 2008 ·Updated March 27, 2012
5
Samples
5
Assays
1
Array Platforms
1
References
Description

Self-renewal is a defining characteristic of stem cells, however the molecular pathways underlying its regulation are poorly understood. Here we demonstrate that conditional inactivation of the Pbx1 proto-oncogene in the hematopoietic compartment results in a progressive loss of long-term hematopoietic stem cells (LT-HSCs) that is associated with concomitant reduction in their quiescence, leading to a defect in the maintenance of self-renewal as assessed by serial transplantation. Transcriptional profiling revealed that multiple stem cell maintenance factors are perturbed in Pbx1-deficient LT-HSCs, which prematurely express a large subset of genes, including cell cycle regulators, normally expressed in non-self-renewing multipotent progenitors. Experiment Overall Design: LT-HSC (Lin-cKit+Sca1+CD34-CD135-) and ST-HSC (Lin-cKit+Sca1+CD34+CD135-) cells were prospectively sorted from the BM of MxCre-.Pbx1f/f control mice harvested 4 weeks after the last injection of poly(I:C).

Array Platforms
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](5 items)
Sample Attributes
Organism
Mus musculus
Experiment Info
Accession
E-GEOD-9189
GEO ID
GSE9189
Type
transcription profiling by array
Organism
Mus musculus
Submitted
Sept. 27, 2007
Released
June 20, 2008
Updated
March 27, 2012
Submitter
Francesca Ficara
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