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E-MTAB-10133 RNA-seq of coding RNA, Cell line - Hi... Homo sapiens, Homo sapiens

Bulk RNA-seq of human induced pluripotent stem cells (hIPSC) and neural progenitor cells (NPC) differentiated usind Dual SMAD inhibition using the prime-seq method

·发布 2021年8月1日
10
样本数
10
实验数
1
相关文献
实验描述

Five hiPSC lines from four individuals were differentiated to neural progenitor cells. The two cell types were compared in regards to marker gene expression of known cell type markers to show that the used bulk RNA-seq protocol, called prime-seq can capture known biological differences.

参考文献
prime-seq, a simple, inexpensive, and powerful bulk RNA-sequencing protocol for detecting differential expression
Aleksandar Janjic, Lucas E. Wange, Johannes W. Bagnoli, Johanna Geuder, Phong Nguyen, Daniel Richter, Beate Vieth, Christoph Ziegenhain, Binje Vick, Ines Hellmann, Wolfgang Enard
样本属性
Organism
Homo sapiens
Disease
normal
Genotype
wild type genotype
Progenitor cell type
induced pluripotent stem cell
Individual
Human5, Human1, Human2, Human3, Human4
Cell type
induced pluripotent stem cell, neural progenitor cell
Cell line
12C2, 1383B2, 63AB2.2, ... 7 other values
Sample barcode
CAGCGGAACTTA, CATCAACTCGAA, CCTAACCTACAA, ... 7 other values
实验信息
登记号
E-MTAB-10133
实验类型
RNA-seq of coding RNA, Cell line - High-throughput sequencing
物种
Homo sapiens, Homo sapiens
发布日期
2021年8月1日
提交者
Lucas Esteban Wange、 Aleksandar Janjic
分析服务
分析服务

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