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E-MTAB-10200 Hi-C Homo sapiens, Homo sapiens

Promoter capture Hi-C of human SGBS (Simpson-Golabi-Behmel syndrome preadipocyte) cells and iPSC-derived hypothalamic cells

·发布 2021年3月20日
2
样本数
2
实验数
2
相关文献
实验描述

To identify distal chromatin contacts between promoters and their putative regulatory elements in SGBS preadipocytes and hypothalamic arcuate-like neurons derived from iPSC, we performed Hi-C with a capture step to enrich the library for contacts involving promoters. Hi-C with a capture step was performed according to PMID: 29988018

参考文献
Extensive pleiotropism and allelic heterogeneity mediate metabolic effects of <i>IRX3</i> and <i>IRX5</i>.
Sobreira DR, Joslin AC, Zhang Q, Williamson I, Hansen GT, Farris KM, Sakabe NJ, Sinnott-Armstrong N, Bozek G, Jensen-Cody SO, Flippo KH, Ober C, Bickmore WA, Potthoff M, Chen M, Claussnitzer M, Aneas I, Nóbrega MA.
PMID: 34083488
Extensive pleiotropism and allelic heterogeneity mediate metabolic effects of <i>IRX3</i> and <i>IRX5</i>.
Sobreira DR, Joslin AC, Zhang Q, Williamson I, Hansen GT, Farris KM, Sakabe NJ, Sinnott-Armstrong N, Bozek G, Jensen-Cody SO, Flippo KH, Ober C, Bickmore WA, Potthoff M, Chen M, Claussnitzer M, Aneas I, Nóbrega MA.
PMID: 34083488
样本属性
Organism
Homo sapiens
Developmental stage
embryo stage
Genotype
wild type genotype
Disease
none, Simpson-Golabi-Behmel syndrome
Cell type
hypothalamic arcuate-like neurons, preadipocyte
Cell line
iPSC derived cell line, SGBS
Organism part
hypothalamus, adipose tissue
实验信息
登记号
E-MTAB-10200
实验类型
Hi-C
物种
Homo sapiens, Homo sapiens
发布日期
2021年3月20日
提交者
Marcelo Nobrega、 Noboru Sakabe
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分析服务

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