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E-MTAB-10417 Cell line - High-throughput sequencin... Mesocricetus auratus, Mesocricetus auratus

Adherent and suspension baby hamster kidney cells have a different cytoskeleton and surface receptor repertoire

·发布 2021年5月15日
9
样本数
9
实验数
实验描述

Animal cell culture, with single cells growing in suspension, ideally in a chemically defined environment, is the workhorse of biopharmaceutical production. The synthetic environment lacks exogenous growth factors and usually requires a time-consuming adaptation process to select cell clones that proliferate in suspension to high cell numbers. The molecular mechanisms that facilitate the adaptation and that take place inside the cell are largely unknown. Especially for cell lines that are used for virus antigen production such as baby hamster kidney (BHK) cells, the restriction of virus growth through the evolution of undesired cell characteristics properties is highly unwanted. The comparison between adherently growing BHK cells and suspension cells with different susceptibility to foot-and-mouth disease virus revealed differences in the expression of cellular receptors such as integrins and heparan sulfates, and in the organization of the actin cytoskeleton. Transcriptome analyses and growth kinetics demonstrated the diversity of BHK cell clones and confirmed the importance of well-characterized parental cell clones and mindful screening to make sure that essential cellular features do not get lost during adaptation.

样本属性
Organism
Mesocricetus auratus
Developmental stage
embryo stage
Organism part
kidney
Cell type
spontaneously immortalized cell line
Cell line
baby hamster kidney
Growth condition
cell suspension culture, adherent culture
Strain
2P, 179, InVitrus
实验信息
登记号
E-MTAB-10417
实验类型
Cell line - High-throughput sequencing, RNA-seq of coding RNA
物种
Mesocricetus auratus, Mesocricetus auratus
发布日期
2021年5月15日
提交者
Florian Pfaff
分析服务
分析服务

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