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E-MTAB-10658 High-throughput sequencing, RNA-seq of … Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. 168

RNAseq of Bacillus subtilis wildtype and cspB-cspD deletion mutant reveals that the lack of the cold shock proteins CspB and CspD affects the expression of about 20% of all genes

·Released June 23, 2021
6
Samples
6
Assays
Description

RNAseq of coding RNA in Bacillus subtilis wildtype and deletion strain GP1971 genotype trpC2 ΔcspB::cat ΔcspD::aphA3 using rRNA depleted mRNA and Illumina TruSeq stranded mRNA libraries, sequenced on Illumina MiSeq system with 2 x 75nt in paired end mode shows that the lack of the cold shock proteins CspB and CspD affects the expression of about 20% of all genes and an increased read-through at transcription terminators suggesting that CspB and CspD might be involved in the control of transcription termination.

Sample Attributes
Organism
Bacillus subtilis subsp. subtilis str. 168
Strain
GP1971 genotype trpC2 ΔcspB::cat ΔcspD::aphA3, wild type
Experiment Info
Accession
E-MTAB-10658
Type
High-throughput sequencing, RNA-seq of coding RNA
Organism
Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. 168
Released
June 23, 2021
Submitter
Patrick Faßhauer、 Joerg Stuelke、 Tobias Busche
External Links
ArrayExpress source
Analysis Services
Analysis Services

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