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E-MTAB-1742 transcription profiling by array Homo sapiens

Transcription profiling by array of SW620 cells transfected with suppressor of cytokine signaling (SOCS1), an inducible negative regulator of cytokine signaling

·发布 2014年5月1日 ·更新 2014年5月13日
3
样本数
4
实验数
1
芯片平台
1
相关文献
实验描述

Suppressor of cytokine signaling (SOCS1) is an inducible negative regulator of cytokine signaling. SOCS1 is expressed in normal colonic epithelium and colon adenocarcinomas. However, the levels of SOCS1 decreased during progression of colon adenocarcinomas, the lowest level being found in the more aggressive stage and least differentiated carcinomas. The restoration of SOCS1 in a colon cancer cell line induced expression of E-cadherin associated with disappearance of the mesenchymal form of the p120ctn. SOCS1 expression is sufficient to revert many characteristics of EMT. This reversion is dependent on the regulation of expression of the transcription factor ZEB1, both at transcriptional and translational levels. Furthermore, miRNA profiling indicates that SOCS1 also upregulates the expression of the mir-200 family of microRNAs, which can promote the mesenchymal-epithelial transition and reduce tumor cell migration. Expression of SOCS1 within the colon carcinoma cell lines dramatically reduced the invasive properties of the cells in vitro. This property was also observed in mice inoculated intracardially with SW620 cells where SOCS1 expression not only reduced the number of animals bearing metastases. Thus, SOCS1 up-regulates expression of E-cadherin to reduce colon cancer cells invasive properties. This pathway could be associated with colorectal cancer survival by reducing the capacity of generating metastases.This project concern 2 replicates in dye-swap of SW620 cells with and without transfected SOCS1 on a 244K custom human genomic expression microarray.

参考文献
Suppressor of cytokine signaling 1 modulates invasion and metastatic potential of colorectal cancer cells.
David M, Naudin C, Letourneur M, Polrot M, Renoir JM, Lazar V, Dessen P, Roche S, Bertoglio J, Pierre J.
PMID: 24726456
芯片平台
A-MEXP-2223
IGR_Agilent_Human_244K_Exonv3(4 例)
样本属性
cell line
SW620
cell type
epithelial cell
disease
colorectal adenocarcinoma
genetic modification
no modificaction, transfection
genotype
SW620-SOCS, wild type genotype
organism
Homo sapiens
phenotype
metastasis
provider
ATCC CCL227
sex
male
specimen with known storage state
frozen
实验信息
登记号
E-MTAB-1742
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2014年5月1日
更新日期
2014年5月13日
提交者
Philippe DESSEN、 Josiane PIERRE
分析服务
分析服务

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