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E-MTAB-5846 ERP023564 RNA-seq of coding RNA Homo sapiens

RNA-seq of human myoblasts isolated from Duchenne muscular dystrophy (DMD) and histologically normal muscle biopsies with or without overexpression of he Polycomb group geneBMI1

Submitted Nov. 1, 2014 ·Released Dec. 15, 2017 ·Updated June 16, 2017
12
Samples
96
Assays
1
References
Description

The Polycomb group gene BMI1 is essential for efficient muscle regeneration in a mouse model of Duchenne Muscular Dystrophy and its enhanced expression in adult skeletal muscle satellite cells ameliorates the muscle strength in this model. In this experiment, we investigated the impact of mild BMI1 overexpression in human cells. We showed translation between observed mouse and human phenotypes. In human myoblasts, BMI1 overexpression increases mitochondrial activity leading to an enhanced energetic state with increased ATP production and concomitant protection against DNA damage both in vitro and upon xenografting in a severe dystrophic mouse model. These preclinical data in mouse models and in human cells provide a strong rationale for the development of pharmacological approaches to target BMI1-mediated mitochondrial regulation and protection from DNA damage to sustain the regenerative potential of the skeletal muscle in conditions of chronic muscle wasting. This ArrayExpress record is for the RNA-seq data from three independently prepared normal and DMD myoblasts cell cultures infected with GFP and BMI1Over lentiviral particles and induced to differentiate for 2 days.

References
Enhanced energetic state and protection from oxidative stress in human myoblasts overexpressing BMI1
Silvia Dibenedetto, Claudia Cabrera, Matthew Ellis, Lesley G. Robson, Paul Knopp, Maria Niklison-Chirou, Francesco Saverio Tedesco, Martina Ragazzi, Valentina Di Foggia, Michael R. Barnes, Aleksandar Radunovic and Silvia Marino
Sample Attributes
cell line
immortalised human myoblasts
cell type
myoblast
disease
Duchenne muscular dystrophy, normal
genotype
BMI1 overexpression, GFP control
individual
SD-1248I, SD-6311I, SD-637AI, SD-7304I, SD-8220I, SD-8306I
organism
Homo sapiens
Experiment Info
Accession
E-MTAB-5846
GEO ID
ERP023564
Type
RNA-seq of coding RNA
Organism
Homo sapiens
Submitted
Nov. 1, 2014
Released
Dec. 15, 2017
Updated
June 16, 2017
Submitter
Michael R Barnes、 Silvia Marino
Analysis Services
Analysis Services

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