Home DatasetsExperiment Details
E-MTAB-7170 RNA-seq of coding RNA Homo sapiens, Homo sapiens

Stable overexpression of either mutant- or wild type SPOP in presence/absence of ΔERG in LNCaP prostate cancer cells

·Released Dec. 10, 2020
12
Samples
12
Assays
Description

Purpose: Little is known about the interplay of driver mutations that never co-occur within the same cancer cells. The latter scenario has been identified in prostate cancer where recurrent gene fusions involving the oncogenic ERG transcription factor and point mutations in the ubiquitin ligase adaptor SPOP are strictly mutually exclusive. We show that ERG and mutant SPOP – even though oncogenic on their own – are together synthetic sick. Description: LNCaP cells in presence/absence of stable ΔERG overexpression, were infected with lentivirus to overexpress either wild-type or mutant SPOP (Y87C, F102C, W131G, F133S).

Sample Attributes
Organism
Homo sapiens
Cell line
LNCaP
Disease
prostate carcinoma
Organism part
prostate
Genotype
pcw107 empty vector, pcw107(blast)_ΔERG, pcw107_SPOP[F102C], ... 9 other values
Phenotype
empty vector, ΔERG overexpression, SPOP[F102C] overexpression, ... 9 other values
Experiment Info
Accession
E-MTAB-7170
Type
RNA-seq of coding RNA
Organism
Homo sapiens, Homo sapiens
Released
Dec. 10, 2020
Submitter
MARCO BOLIS
External Links
ArrayExpress source
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]