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E-MTAB-9076 transcription profiling by array, Cell … Homo sapiens, Homo sapiens

Transforming growth factor β (TGFβ) and BMP7 regulate glioblastoma stem cells differentiation status

·Released Sept. 1, 2020
27
Samples
27
Assays
1
Array Platforms
Description

Glioblastoma stem cells (GSCs) fate is controlled by environmental cues, among which cytokines play a crucial role. The transforming growth factor β (TGFβ) family signaling pathways controls GSCs. On one hand, TGFβ promotes cell proliferation in GBM, it induces the expression of platelet-derived growth factor-B (PDGFB). Moreover, TGFβ, via its signaling mediators Smad2/3, induces the expression of the cytokine leukemia inhibitory factor (LIF) and Sox4, which in turn enhances the expression of the stem cell transcription factor Sox2; this increases the self-renewal capacity of the GSCs and their stemness characteristics, and enhances the GSC tumor-initiating potential. On the other hand, Bone morphogenic proteins (BMPs) are known to promote GSC differentiation towards the astrocytic phenotype. To further understand which genes are regulated by TGFβ and BMP7 in GSCs we performed a microarray in the Affymetrix HTA2 platform in three different glioblastoma cell line, U2987, and two patient-derived glioblastoma stem cells, U3031MG and U3034MG, in the presence or absence of 5 ng/ml of TGFβ or 30 ng/ml BMP7 for 24 h, three biological replicates per condition.

Array Platforms
A-GEOD-20265
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version](27 items)
Sample Attributes
Organism
Homo sapiens
Developmental stage
Adult
Disease
brain glioblastoma
Genotype
wild type genotype
Organism part
brain
Cell line
U2987, U3031MG, U3034MG
Growth condition
BMP7, Untreated, TGF-beta
Experiment Info
Accession
E-MTAB-9076
Type
transcription profiling by array, Cell line - One-color microarray
Organism
Homo sapiens, Homo sapiens
Released
Sept. 1, 2020
Submitter
Laia Caja Puigsubirà、 Aristidis Moustakas
External Links
ArrayExpress source
Analysis Services
Analysis Services

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