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E-MTAB-9897 ChIP-seq Mus musculus, Mus musculus

CUT&RUN Targeting c-FOS, c-JUN and SOX2 in neurospheres derived from mouse brain cells

·发布 2021年4月1日
7
样本数
28
实验数
1
相关文献
实验描述

Other than in the development of the brain, SOX2 is essential for the long-term self-renewal of neural stem cells (NSCs). The mechanisms of how SOX2 maintains the stemness of NSCs is not yet understood. We have identified Fos as a downstream target of SOX2, and therefore used CUT&RUN to investigate where these transcription factors - and the c-FOS partner c-JUN - interact with the genome. By comparing binding patterns of c-FOS, c-JUN and SOX2, we find that they co-occupate the promoter of the SOCS3 locus, which we also have identified as a gene that rescues SOX2 deletion induced senescence when overexpressed in neurospheres grown from Sox2-deleted mouse NSCs. Taken together, our data provide a basis for elucidating a gene regulatory network necessary for the maintenance of self-renewal in post-embryonic neural stem cells.

参考文献
Sox2 controls neural stem cell self-renewal through a Fos-centered gene regulatory network.
Pagin M, Pernebrink M, Giubbolini S, Barone C, Sambruni G, Zhu Y, Chiara M, Ottolenghi S, Pavesi G, Wei CL, Cantù C, Nicolis SK.
PMID: 33739574
样本属性
Organism
Mus musculus
Genotype
Sox2 deletion
Organism part
brain
Cell type
neural stem cell
Growth condition
neurophere
实验信息
登记号
E-MTAB-9897
实验类型
ChIP-seq
物种
Mus musculus, Mus musculus
发布日期
2021年4月1日
提交者
Mattias Pernebrink、 Silvia Nicolis、 Claudio Cantù
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