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E-MTAB-9969 Human - Single-cell sequencing, RNA-s... Homo sapiens, Homo sapiens

Somatic mutations in lymphocytes in patients with immune-mediated aplastic anemia

·发布 2021年3月24日
6
样本数
6
实验数
实验描述

In this study, we investigated somatic mutations of CD4+ and CD8+ T cells in patients with immune-mediated aplastic anemia (AA). To understand the role of mutations, we performed single-cell level analysis of 6 longitudinal samples of 2 AA patients carrying STAT3 or KRAS and other mutations in CD8+ T cells. The analysis was performed using V(D)J and 5' gene expression platform (10X Genomics). STAT3 mutated clone was clearly distinguishable from other CD8+ T cells and showed a cytotoxic phenotype, attenuated by successful immunosuppressive treatment. Our results suggest that somatic mutations in T cells can alter T cell phenotype warranting further investigation of their role in the pathogenesis of immune-mediated AA.

样本属性
Organism
Homo sapiens
Sex
female
Disease
idiopathic aplastic anemia
Cell type
mononuclear cell
Age
59 year, 58 year, 61 year, 51 year, 54 year
Organism part
bone marrow, blood
Individual
AA4, AA3
实验信息
登记号
E-MTAB-9969
实验类型
Human - Single-cell sequencing, RNA-seq of coding RNA from single cells
物种
Homo sapiens, Homo sapiens
发布日期
2021年3月24日
提交者
Sofie Lundgren、 Satu Mustjoki
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