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E-SNGR-8 transcription profiling by array Homo sapiens

Transcription profiling of immortalised human mammary luminal epithelial cells and variants expressing a moderate and high level of ERBB2

·发布 2013年1月30日 ·更新 2013年1月30日
8
样本数
46
实验数
1
芯片平台
实验描述

To investigate changes in gene expression associated with ERBB2, expression profiling of immortalised human mammary luminal epithelial cells and variants expressing a moderate and high level of ERBB2 has been carried out using cDNA microarrays corresponding to approximately 6,000 unique genes/ESTs. Sixty-three (63) significantly up- or down-regulated (>2.0 fold) genes were identified and further validated by RT-PCR and Northern blot analysis as well as microarray comparisons with a spontaneously ERBB2- overexpressing breast cancer cell line and ERBB2-positive primary breast tumours. Proteins predicted to be associated ERBB2 overexpression in breast cancers were analysed together with their clinical relevance by antibody screening using a tissue array. Differentially regulated genes include those involved in cell matrix interactions including P4HA2 (proline 4-hydroxylase), galectin 1 (LGALS1) and galectin 3 (LGALS3), FN1 (fibronectin 1), and CDH3 (p-cadherin) and cell proliferation (CRIP1, IGFBP3) and transformation (S100P, S100A4). A number of genes associated with MYC signalling were also differentially expressed, including NDRG1, USF2 and the epithelial membrane proteins 1 and 3 (EMP1, EMP3). These data represent profile of the transcriptional changes associated with ERBB2-related pathways in the breast, and identify novel and potentially useful targets for prognosis and therapy.

芯片平台
A-SNGR-5
Sanger Institute H. sapiens 10K array, Hver1.2.1(46 例)
样本属性
BioSourceProvider
ATCC, M.O'Hare, The Institute for Cancer Research (ICR)
CellLine
BT-474, C3.6, C5.2, HB4a
CellType
epithelial
Channel
Cy3, Cy5
Organism
Homo sapiens
OrganismPart
mammary gland
Pathology
invasive ductal carcinoma
Sex
female
实验信息
登记号
E-SNGR-8
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2013年1月30日
更新日期
2013年1月30日
提交者
Karen Bulmer、 Tim Dexter、 Cordelia Langford、 Sunil R Lakhani、 Robert A Harris、 Ricardo LA Silva、 Luiz FL Reis、 Alan Mackay、 Peter Simpson、 Rob Andrews、 Parmjit S Jat、 Allison Jones、 Michael J O'Hare、 Chris Jones
分析服务
分析服务

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