MIR153-1 (microRNA 153-1)

symbol:
MIR153-1
locus group:
non-coding RNA
location:
2q35
gene_family:
MicroRNAs
alias symbol:
hsa-mir-153-1
alias name:
None
entrez id:
406944
ensembl gene id:
ENSG00000207647
ucsc gene id:
uc010zld.1
refseq accession:
NR_029688
hgnc_id:
HGNC:31539
approved reserved:
2004-04-23
2q35
ChineseEnglish

MicroRNAs (miRNAs) are short (20–24 nt) noncoding RNAs that post-transcriptionally regulate gene expression in multicellular organisms by affecting both mRNA stability and translation. They are transcribed by RNA polymerase II as parts of capped and polyadenylated primary transcripts (pri-miRNAs), which may be protein-coding or noncoding. Pri-miRNAs are cleaved by Drosha ribonuclease III to produce approximately 70-nt stem-loop precursor miRNAs (pre-miRNAs), which are further processed by cytoplasmic Dicer into mature miRNAs and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into the RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing and most commonly causes translational inhibition or destabilization of the target mRNA. The RefSeq record represents the predicted microRNA stem-loop.

Nucleotide sequence of MIR153-1:[NCBI]
Loading Gene Browser...
SNP variants of MIR153-1:           Showing partial SNPs
rs4674374       rs6436132       rs11887718       rs12621717       rs59726321       rs72955491       rs75297529       rs76884407       rs77242849       rs77891885       rs111853777       rs112728964       rs112910848       rs140623114       rs145433981       rs145546871       rs147159908      

Tissue expression of MIR153-1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
GATCTGCAGCTAGTATTCTCAC
58
CACACCTGCCAATGATCAC
59
ATCTGCAGCTAGTATTCTCACTC
59
CACACCTGCCAATGATCAC
59
ATCTGCAGCTAGTATTCTCAC
57
CACACCTGCCAATGATCAC
59
      No data available

Subcellular localization of MIR153-1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR153-1:

microRNAs potentially regulating MIR153-1:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

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