MIR200B (microRNA 200b)

symbol:
MIR200B
locus group:
non-coding RNA
location:
1p36.33
gene_family:
MicroRNAs
alias symbol:
hsa-mir-200b
alias name:
None
entrez id:
406984
ensembl gene id:
ENSG00000207730
ucsc gene id:
uc001acw.3
refseq accession:
NR_029639
hgnc_id:
HGNC:31579
approved reserved:
2004-04-23
1p36.33
ChineseEnglish

microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

Nucleotide sequence of MIR200B:[NCBI]
Loading Gene Browser...
SNP variants of MIR200B:           Showing partial SNPs
rs9442386       rs72563729       rs72563730       rs77342103       rs80296038       rs111233725       rs113882248       rs114497437       rs115542311       rs140316058       rs143277733       rs143556005       rs148003751       rs185213533       rs369057542       rs369073699       rs369205810      

Tissue expression of MIR200B:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
      No data available

Subcellular localization of MIR200B (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR200B:

microRNAs potentially regulating MIR200B:     

Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Disease Progression 0.12 1 0 CTD_human
Neoplasm Invasiveness 0.12 1 0 CTD_human
Precancerous Conditions 0.12 1 0 CTD_human
Liver Neoplasms, Experimental 0.12 1 0 CTD_human
Mammary Neoplasms 0.12 2 0 CTD_human
Neoplastic Cell Transformation 0.12 1 0 CTD_human
Malignant neoplasm of breast 0.000814326 3 0 BeFree
Breast Carcinoma 0.000814326 3 0 BeFree
Neoplasm Metastasis 0.000814326 3 0 BeFree
Tumor Progression 0.000542884 2 0 BeFree
The Role of MicroRNA-200 Family in Gastrointestinal Cancers.
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Aberrant miR-21 and miR-200b expression and its pro-fibrotic potential in hypertrophic scars.
Zhou Renpeng, Zhang Qi, Zhang Yun, Fu Shibo, Wang Chen Exp Cell Res IF: 3.5 2016-05-24
Androgen receptor as a regulator of ZEB2 expression and its implications in epithelial-to-mesenchymal transition in prostate cancer.
Jacob Sheeba, Nayak S, Fernandes Gwendolyn, Barai R S, Menon S, Chaudhari U K, Kholkute S D, Sachdeva Geetanjali Endocr Relat Cancer IF: 4.4 2015-01-22
Study of microRNAs (miRNAs) that are predicted to target the autoantigens Ro/SSA and La/SSB in primary Sjögren's Syndrome.
Gourzi V C, Kapsogeorgou E K, Kyriakidis N C, Tzioufas A G Clin Exp Immunol IF: 3.9 2015-12-17
Molecular regulation of ovarian cancer cell invasion.
Sun Ningxia, Zhang Qing, Xu Chen, Zhao Qian, Ma Yan, Lu Xinmei, Wang Liang, Li Wen Tumour Biol IF: 3.650 2015-04-17
Methylsorb: a simple method for quantifying DNA methylation using DNA-gold affinity interactions.
Sina Abu Ali Ibn, Carrascosa Laura G, Palanisamy Ramkumar, Rauf Sakandar, Shiddiky Muhammad J A, Trau Matt Anal Chem IF: 7.3 2015-09-23
Activation of miR200 by c-Myb depends on ZEB1 expression and miR200 promoter methylation.
Pieraccioli Marco, Imbastari Francesca, Antonov Alexey, Melino Gerry, Raschellà Giuseppe Cell Cycle IF: 3.9 2014-03-05
Aberrant microRNA expression in endometrial carcinoma using formalin-fixed paraffin-embedded (FFPE) tissues.
Lee Taek Sang, Jeon Hye Won, Kim Yong Beom, Kim Young A, Kim Min A, Kang Soon Beom PLoS One IF: 2.6 2014-07-28
TGF-β1 stimulates human Tenon's capsule fibroblast proliferation by miR-200b and its targeting of p27/kip1 and RND3.
Tong Jun, Fu Yuxuan, Xu Xinyu, Fan Shuxin, Sun Hong, Liang Ya, Xu Kai, Yuan Zhilan, Ge Yingbin Invest Ophthalmol Vis Sci IF: 5.5 2014-05-20
TGFβ-induced c-Myb affects the expression of EMT-associated genes and promotes invasion of ER+ breast cancer cells.
Cesi Vincenzo, Casciati Arianna, Sesti Fabiola, Tanno Barbara, Calabretta Bruno, Raschellà Giuseppe Cell Cycle IF: 3.9 2012-08-29

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