MIR26A1 (microRNA 26a-1)

symbol:
MIR26A1
locus group:
non-coding RNA
location:
3p22.2
gene_family:
MicroRNAs
alias symbol:
hsa-mir-26a-1
alias name:
None
entrez id:
407015
ensembl gene id:
ENSG00000199075
ucsc gene id:
uc011ayg.2
refseq accession:
NR_029499
hgnc_id:
HGNC:31610
approved reserved:
2004-04-23
3p22.2
ChineseEnglish

microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

Nucleotide sequence of MIR26A1:[NCBI]
Loading Gene Browser...
SNP variants of MIR26A1:           Showing partial SNPs
rs1573291       rs1977911       rs1985420       rs7372209       rs11719907       rs41276521       rs73058983       rs75544883       rs77665509       rs78446774       rs79726899       rs79837040       rs79990863       rs80047096       rs80241158       rs112161717       rs113735028      

Tissue expression of MIR26A1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CCTCGTTCAAGTAATCCAGG
58
AAGTAACCAAGAATAGGCCCA
59
GCCTCGTTCAAGTAATCCAG
59
AGTAACCAAGAATAGGCCCA
59
GCCTCGTTCAAGTAATCCA
58
AGTAACCAAGAATAGGCCCA
59
      No data available

Subcellular localization of MIR26A1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR26A1:

microRNAs potentially regulating MIR26A1:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Arthritis, Experimental 0.08 1 0 CTD_rat
Liver Neoplasms, Experimental 0.08 1 0 CTD_rat
Kidney Neoplasm 0.002367032 1 0 GAD
Renal Cell Carcinoma 0.002367032 1 0 GAD
Malignant neoplasm of esophagus 0.002367032 1 0 GAD
Neoplasm Recurrence, Local 0.002367032 1 0 GAD
Carcinoma of lung 0.000271442 1 0 BeFree
Experimental Autoimmune Encephalomyelitis 0.000271442 1 0 BeFree
Malignant tumor of colon 0.000271442 1 0 BeFree
Colon Carcinoma 0.000271442 1 0 BeFree
NPM-ALK up-regulates iNOS expression through a STAT3/microRNA-26a-dependent mechanism.
Zhu Haifeng, Vishwamitra Deeksha, Curry Choladda V, Manshouri Roxsan, Diao Lixia, Khan Aarish, Amin Hesham M J Pathol IF: 5.4 2013-06-13
Epigenetic silencing of miR-26A1 in chronic lymphocytic leukemia and mantle cell lymphoma: Impact on EZH2 expression.
Kopparapu Pradeep Kumar, Bhoi Sujata, Mansouri Larry, Arabanian Laleh S, Plevova Karla, Pospisilova Sarka, Wasik Agata M, Croci Giorgio Alberto, Sander Birgitta, Paulli Marco, Rosenquist Richard, Kanduri Meena Epigenetics IF: 3.7 0000-00-00

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