MIR320C1 (microRNA 320c-1)

Gene Basic Information

Gene Basic Information

symbol:
MIR320C1
locus group:
non-coding RNA
location:
18q11.2
gene_family:
MicroRNAs
alias symbol:
hsa-mir-320c-1
alias name:
None
entrez id:
100302135
ensembl gene id:
ENSG00000221493
ucsc gene id:
uc021uia.1
refseq accession:
NR_031565
hgnc_id:
HGNC:35248
approved reserved:
2008-11-03

Chromosome Location

Chromosome Location

18q11.2

Gene Summary

Gene Summary

ChineseEnglish

microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

OMIM entry for MIR320C1     Wikipedia entry for MIR320C1

Gene Sequence

Gene Sequence

Nucleotide sequence of MIR320C1:[NCBI]
Loading Gene Browser...

Gene Variants

Gene Variants

SNP variants of MIR320C1:           Showing partial SNPs
rs6508544       rs7343008       rs10164204       rs11662840       rs61253620       rs71371365       rs75164898       rs77065623       rs111908997       rs112488395       rs140479918       rs141315616       rs142271594       rs145997670       rs146631314       rs147020262       rs147831128      

Gene Expression

Gene Expression

Tissue expression of MIR320C1:    [UniProt]

Gene expression across tissues

Gene Primers

Gene Primers

Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
AAATGAGGCCTTCTCTTCCC
59
TTCTACCCTCTCAACCCAG
58
AAATGAGGCCTTCTCTTCC
57
TTCTACCCTCTCAACCCAG
58
AATGAGGCCTTCTCTTCCC
59
TTCTACCCTCTCAACCCAG
58

Transcription Factors

Transcription Factors

      No data available

Gene Ontology

Subcellular localization of MIR320C1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR320C1:

Related microRNA

Related microRNA

microRNAs potentially regulating MIR320C1:     

Gene Interactions

Gene Interactions

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Interacting Gene Interaction Source/Score

Gene Pathways

Gene Pathways

Related Diseases

Related Diseases

Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

Related Publications

Related Publications

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