MIR3689D1 (microRNA 3689d-1)

Gene Basic Information

Gene Basic Information

symbol:
MIR3689D1
locus group:
non-coding RNA
location:
9q34.3
gene_family:
MicroRNAs
alias symbol:
hsa-mir-3689d-1
alias name:
None
entrez id:
100616131
ensembl gene id:
ENSG00000265848
ucsc gene id:
uc022bpd.1
refseq accession:
NR_039693
hgnc_id:
HGNC:41621
approved reserved:
2011-05-02

Chromosome Location

Chromosome Location

9q34.3

Gene Summary

Gene Summary

ChineseEnglish

microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

OMIM entry for MIR3689D1     Wikipedia entry for MIR3689D1

Gene Sequence

Gene Sequence

Nucleotide sequence of MIR3689D1:[NCBI]
Loading Gene Browser...

Gene Variants

Gene Variants

SNP variants of MIR3689D1:           Showing partial SNPs
rs3128570       rs34165693       rs34671824       rs34712836       rs34717868       rs34933499       rs35679521       rs35883507       rs36167344       rs56179815       rs62571441       rs62571442       rs71482256       rs71483235       rs71483236       rs71483237       rs71483238      

Gene Expression

Gene Expression

Tissue expression of MIR3689D1:    [UniProt]

Gene expression across tissues

Gene Primers

Gene Primers

Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TGTGATCTCACACTCGCTG
60
AGAACAGGATCACACCTCC
59
GTGTGATCTCACACTCGCT
60
GAACAGGATCACACCTCCC
60
TGTGATCTCACACTCGCTG
60
GAACAGGATCACACCTCCC
60

Transcription Factors

Transcription Factors

      No data available

Gene Ontology

Subcellular localization of MIR3689D1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR3689D1:

Related microRNA

Related microRNA

microRNAs potentially regulating MIR3689D1:     

Gene Interactions

Gene Interactions

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Interacting Gene Interaction Source/Score

Gene Pathways

Gene Pathways

Related Diseases

Related Diseases

Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

Related Publications

Related Publications

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