MIR6079 (microRNA 6079)

symbol:
MIR6079
locus group:
non-coding RNA
location:
1p34.1
gene_family:
MicroRNAs
alias symbol:
hsa-mir-6079
alias name:
None
entrez id:
102464830
ensembl gene id:
ENSG00000283477
ucsc gene id:
None
refseq accession:
NR_106727
hgnc_id:
HGNC:50114
approved reserved:
2014-03-24
1p34.1
ChineseEnglish

MicroRNAs (miRNAs) are short (20–24 nucleotides) noncoding RNAs that post-transcriptionally regulate gene expression in multicellular organisms by affecting mRNA stability and translation. miRNA genes are transcribed by RNA polymerase II as capped and polyadenylated primary transcripts (pri-miRNAs), which can be protein-coding or noncoding. The primary transcript is cleaved by the ribonuclease III enzyme Drosha to generate an approximately 70-nucleotide stem-loop precursor miRNA (pre-miRNA), which is further cut by cytoplasmic Dicer to produce mature miRNA and antisense miRNA star (miRNA*) products. Mature miRNA is incorporated into the RNA-induced silencing complex (RISC), which recognizes target mRNAs by imperfect base pairing and most often leads to translational repression or destabilization of the target mRNA. The RefSeq record for MIR6079 represents a predicted microRNA stem-loop. Provided by RefSeq, Sep 2009.

Nucleotide sequence of MIR6079:[NCBI]
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SNP variants of MIR6079:           Showing partial SNPs
rs3011217       rs3011218       rs3838470       rs9662379       rs10684664       rs11310494       rs12084315       rs71892320       rs72886898       rs72886901       rs78656836       rs111384159       rs111965458       rs112381977       rs114094493       rs115360648       rs115848905      

Tissue expression of MIR6079:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
      No data available

Subcellular localization of MIR6079 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR6079:

microRNAs potentially regulating MIR6079:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

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