MIR8080 (microRNA 8080)

symbol:
MIR8080
locus group:
non-coding RNA
location:
2p12
gene_family:
MicroRNAs
alias symbol:
hsa-mir-8080
alias name:
None
entrez id:
102465877
ensembl gene id:
ENSG00000276917
ucsc gene id:
None
refseq accession:
NR_107047
hgnc_id:
HGNC:49989
approved reserved:
2014-03-24
2p12
ChineseEnglish

MicroRNAs (miRNAs) are short (20–24 nt) noncoding RNAs that participate in post-transcriptional regulation of gene expression in multicellular organisms by affecting mRNA stability and translation. miRNAs are transcribed by RNA polymerase II as capped and polyadenylated primary transcripts (pri-miRNAs), which can be either protein-coding or noncoding. The primary transcript is cleaved by the RNase III enzyme Drosha to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by cytoplasmic Dicer to yield mature miRNA and antisense miRNA star (miRNA*) products. Mature miRNA is incorporated into the RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly leads to translational inhibition or destabilization of the target mRNA. The RefSeq represents a predicted microRNA stem-loop. [Provided by RefSeq, Sep 2009]

Nucleotide sequence of MIR8080:[NCBI]
Loading Gene Browser...
SNP variants of MIR8080:           Showing partial SNPs
rs713261       rs2974160       rs4852534       rs6736489       rs7582790       rs7582888       rs10670844       rs35357530       rs62141581       rs72918613       rs74374414       rs77252096       rs77532466       rs77640560       rs78198100       rs114178608       rs114932744      

Tissue expression of MIR8080:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CTAAGAAGGACACTGGTGTC
58
AAGTGTCTTCCAAACCTCC
57
TCTAAGAAGGACACTGGTGTC
59
AGTGTCTTCCAAACCTCCC
59
CTAAGAAGGACACTGGTGTC
58
AGTGTCTTCCAAACCTCCC
59
      No data available

Subcellular localization of MIR8080 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR8080:

microRNAs potentially regulating MIR8080:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

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