MIR96 (microRNA 96)

symbol:
MIR96
locus group:
non-coding RNA
location:
7q32.2
gene_family:
MicroRNAs
alias symbol:
hsa-mir-96
alias name:
None
entrez id:
407053
ensembl gene id:
ENSG00000199158
ucsc gene id:
uc003vpc.4
refseq accession:
NR_029512
hgnc_id:
HGNC:31648
approved reserved:
2004-04-23
7q32.2
ChineseEnglish

microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

Nucleotide sequence of MIR96:[NCBI]
Loading Gene Browser...
SNP variants of MIR96:           Showing partial SNPs
rs4335057       rs7811300       rs12538588       rs13231740       rs17557722       rs41274239       rs41281222       rs72631833       rs73159662       rs73487512       rs74994806       rs75051943       rs75434827       rs75906219       rs77887327       rs78730613       rs79385780      

Tissue expression of MIR96:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
      No data available

Subcellular localization of MIR96 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for MIR96:

microRNAs potentially regulating MIR96:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Neoplasm Metastasis 0.120814326 4 0 BeFree_CTD_human
DEAFNESS, AUTOSOMAL DOMINANT 50 0.12 0 0 CTD_human
hearing impairment 0.12 2 0 CTD_human
Prostate carcinoma 0.001628651 6 0 BeFree
Pancreatic carcinoma 0.001357209 5 0 BeFree
Malignant neoplasm of prostate 0.001357209 5 0 BeFree
Malignant neoplasm of pancreas 0.001357209 5 0 BeFree
Carcinogenesis 0.001085767 4 0 BeFree
Liver carcinoma 0.001085767 4 0 BeFree
Hearing Loss, Mixed Conductive-Sensorineural 0.000814326 3 0 BeFree
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Novel signaling pathways in pulmonary arterial hypertension (2015 Grover Conference Series).
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Selective inhibition of protein arginine methyltransferase 5 blocks initiation and maintenance of B-cell transformation.
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Decreased platelet miR-223 expression is associated with high on-clopidogrel platelet reactivity.
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ACTH-dependent regulation of microRNA as endogenous modulators of glucocorticoid receptor expression in the adrenal gland.
Riester Anna, Issler Orna, Spyroglou Ariadni, Rodrig Sharon Haramati, Chen Alon, Beuschlein Felix Endocrinology IF: 3.8 2012-03-05
Integrated profiling of diffuse large B-cell lymphoma with 7q gain.
Chigrinova Ekaterina, Mian Michael, Shen Yulei, Greiner Timothy C, Chan Wing C, Vose Julie M, Inghirami Giorgio, Chiappella Annalisa, Baldini Luca, Ponzoni Maurilio, Ferreri Andrés J M, Franceschetti Silvia, Gaidano Gianluca, Tucci Alessandra, Facchetti Fabio, Lazure Thierry, Lambotte Olivier, Montes-Moreno Santiago, Piris Miguel A, Zucca Emanuele, Kwee Ivo, Bertoni Francesco Br J Haematol IF: 3.6 2011-07-05
miR-96 regulates the progression of differentiation in mammalian cochlear inner and outer hair cells.
Kuhn Stephanie, Johnson Stuart L, Furness David N, Chen Jing, Ingham Neil, Hilton Jennifer M, Steffes Georg, Lewis Morag A, Zampini Valeria, Hackney Carole M, Masetto Sergio, Holley Matthew C, Steel Karen P, Marcotti Walter Proc Natl Acad Sci U S A IF: 9.5 2011-03-30
MicroRNAs and epigenetic regulation in the mammalian inner ear: implications for deafness.
Friedman Lilach M, Avraham Karen B Mamm Genome IF: 2.6 2010-03-23
Regulation of the expression of components of the exocytotic machinery of insulin-secreting cells by microRNAs.
Lovis Pascal, Gattesco Sonia, Regazzi Romano Biol Chem IF: 2.5 2008-04-18
Exploring regulatory networks of miR-96 in the developing inner ear.
Lewis Morag A, Buniello Annalisa, Hilton Jennifer M, Zhu Fei, Zhang William I, Evans Stephanie, van Dongen Stijn, Enright Anton J, Steel Karen P Sci Rep IF: 4.9 0000-00-00

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