PGPEP1 (pyroglutamyl-peptidase I)

symbol
PGPEP1
locus group
protein-coding gene
location
19p13.11
gene_family
-
alias symbol
PGP-I|Pcp|PGP|PGPI
alias name
pyroglutamyl aminopeptidase
entrez id
54858
ensembl gene id
ENSG00000130517
ucsc gene id
uc002nis.2
refseq accession
NM_017712
hgnc_id
HGNC:13568
approved reserved
2001-01-26
19p13.11
ChineseEnglish

PGPEP1 (Pyroglutamyl-peptidase I) encodes a member of the pyroglutamyl-peptidase family, a group of evolutionarily conserved enzymes that play a critical role in maintaining cellular proteostasis by regulating the post-translational modification and degradation of proteins. The primary function of the PGPEP1 protein is to catalyze the hydrolysis of N-terminal pyroglutamate, a cyclic form of glutamic acid, from peptides and proteins, thereby serving as a key step in the maturation of neuropeptides and hormonal precursors. This enzymatic activity is predominantly localized to the cytoplasm, although specific isoforms may also be found in lysosomes, where they contribute to the breakdown of modified peptide substrates. By removing the N-terminal pyroglutamate, PGPEP1 ensures the proper activation or inactivation of signaling molecules, such as thyrotropin-releasing hormone (TRH), and prevents the accumulation of inactive or potentially toxic modified peptides. Disruption of this process, whether through loss-of-function mutations that lead to the buildup of pyroglutamylated peptides or overexpression that causes aberrant degradation of peptide substrates, can significantly interfere with intracellular signaling pathways and metabolic homeostasis. While the specific mechanisms linking PGPEP1 to human pathology are still under investigation, emerging evidence suggests its involvement in neurological disorders and metabolic dysregulations, highlighting the importance of precise control over N-terminal peptide processing in maintaining neuronal and systemic health.

Nucleotide sequence of PGPEP1:[NCBI]
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Protein Sequence
1MEQPRKAVVV TGFGPFGEHT VNASWIAVQE LEKLGLGDSV
41DLHVYEIPVE YQTVQRLIPA LWEKHSPQLV VHVGVSGMAT
81 TVTLEKCGH NKGYKGLDNC RFCPGSQCCV EDGPESIDSI
121IDMDAVCKRV TTLGLDVSVT ISQDAGRYLC DFTYYTSLYQ
161S HGRSAFVH VPPLGKPYNA DQLGRALRAI IEEMLDLLEQ
201SEGKINYCHK H
Structure predicted by AlphaFold DB(UniProt: Q9NXJ5). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of PGPEP1:           Showing partial SNPs
rs7226       rs749451       rs888662       rs1019445       rs1043063       rs1043078       rs1043081       rs1055456       rs1055458       rs1978423       rs2112176       rs2161106       rs2302946       rs3195944       rs3222980       rs3746179       rs3746181      

Tissue expression of PGPEP1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
GAGATTCCGGTTGAGTACC
57
TCGCAGAGATATCTGTGGA
58
CATCATCGACATGGATGCTG
59
AGTCGCAGAGATATCTGCC
59
AAATGATCCTTCCACCTCGG
60
TTCTAGCTCCTGATGGCAG
59
ATCATCGACATGGATGCTG
58
AAACACAGTCACCTTTGGC
59
CATCATCGACATGGATGCT
58
CTTCTGACTTCCAAGGCTG
58
TGGTAGTGACGGGATTTGG
59
AATCTCGTACACATGCAGGT
59
TGGTAGTGACGGGATTTGG
59
AGCCAGGGCAATATAGTGAG
59
TGGTAGTGACGGGATTTGG
59
AATCTCGTACACATGCAGGT
60
AAATGATCCTTCCACCTCGG
60
TTCTAGCTCCTGATGGCAG
59
CATCATCGACATGGATGCTG
59
AGTCGCAGAGATATCTGCC
59

Subcellular localization of PGPEP1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for PGPEP1:

GO ID
Protein
Source DB
GO:0005829
M0QX66 (UniProtKB)
IEA
GO:0006508
M0QX66 (UniProtKB)
IEA
GO:0016920
M0QX66 (UniProtKB)
IEA
GO:0005829
M0R0B6 (UniProtKB)
IEA
GO:0006508
M0R0B6 (UniProtKB)
IEA
GO:0016920
M0R0B6 (UniProtKB)
IEA
GO:0005829
M0R3H3 (UniProtKB)
IEA
GO:0006508
M0R3H3 (UniProtKB)
IEA
GO:0016920
M0R3H3 (UniProtKB)
IEA
GO:0005829
Q9NXJ5 (UniProtKB)
IBA
GO:0006508
Q9NXJ5 (UniProtKB)
IBA
GO:0008234
Q9NXJ5 (UniProtKB)
IEA
GO:0016920
Q9NXJ5 (UniProtKB)
IEA
GO:0005829
S4R2Y9 (UniProtKB)
IEA
GO:0006508
S4R2Y9 (UniProtKB)
IEA
GO:0016920
S4R2Y9 (UniProtKB)
IEA
GO:0005829
U3KQ24 (UniProtKB)
IEA
GO:0006508
U3KQ24 (UniProtKB)
IEA
GO:0016920
U3KQ24 (UniProtKB)
IEA
GO:0005829
U3KQG9 (UniProtKB)
IEA
GO:0006508
U3KQG9 (UniProtKB)
IEA
GO:0016920
U3KQG9 (UniProtKB)
IEA
String
BioGrid
mentha
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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Schizophrenia 0.002638474 1 1 BeFree_GAD
Coronary Artery Disease 0.002638474 1 1 BeFree_GAD
Tobacco Use Disorder 0.002367032 1 0 GAD
Mental disorders 0.002367032 1 1 GAD
Pneumocystis jiroveci pneumonia 0.001900093 7 0 BeFree
Spina Bifida 0.000814326 3 0 BeFree
Malignant neoplasm of breast 0.000542884 2 0 BeFree
Exencephaly 0.000542884 2 0 BeFree
Coronary heart disease 0.000542884 2 0 BeFree
Pneumonia 0.000542884 2 0 BeFree
Genetic and functional analysis of pyroglutamyl-peptidase I in coeliac disease.
Monsuur Alienke J, Stepniak Dariusz, Diosdado Begoña, Wapenaar Martin C, Mearin Maria Luisa, Koning Frits, Wijmenga Cisca Eur J Gastroenterol Hepatol IF: 2.1 2007-03-06

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