PTPN13 (protein tyrosine phosphatase non-receptor type 13)

symbol:
PTPN13
locus group:
protein-coding gene
location:
4q21.3
gene_family:
Protein tyrosine phosphatases, non-receptor type
alias symbol:
PTP1E|PTP-BAS|PTPL1|PTP-BL
alias name:
APO-1/CD95 (Fas)-associated phosph…
entrez id:
5783
ensembl gene id:
ENSG00000163629
ucsc gene id:
uc003hpz.4
refseq accession:
NM_006264
hgnc_id:
HGNC:9646
approved reserved:
1995-02-17
4q21.3

PTPN13(Protein Tyrosine Phosphatase Non-Receptor Type 13)是一种非受体型蛋白酪氨酸磷酸酶,属于PTP(Protein Tyrosine Phosphatase)基因家族。该家族的主要功能是通过去磷酸化调控细胞内的信号转导通路,从而影响细胞生长、分化、凋亡和免疫反应等过程。PTPN13在多种组织中表达,尤其在脑、心脏和骨骼肌中表达较高。它的主要作用位点包括细胞质和细胞膜,通过与其他信号分子(如Fas受体、β-catenin和JNK等)相互作用,参与调控细胞凋亡、Wnt信号通路和应激反应。PTPN13的突变或表达异常与多种疾病相关,包括癌症(如乳腺癌、结肠癌和肺癌)、神经退行性疾病和自身免疫性疾病。突变可能导致其磷酸酶活性丧失或功能异常,从而破坏细胞信号平衡,促进肿瘤发生或细胞凋亡失调。PTPN13过表达可能抑制某些促凋亡信号通路(如Fas介导的凋亡),增加细胞存活,与肿瘤发展相关;而降低表达可能增强凋亡敏感性或导致信号通路过度激活,影响组织稳态。PTPN13属于PTP家族中的非受体型亚群,该家族成员均含有保守的催化结构域,但通过不同的蛋白互作域(如PDZ或FERM结构域)实现功能特异性。PTP家族在调控酪氨酸磷酸化水平中起关键作用,与激酶共同维持细胞信号网络的动态平衡。

ChineseEnglish

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP is a large intracellular protein. It has a catalytic PTP domain at its C-terminus and two major structural domains: a region with five PDZ domains and a FERM domain that binds to plasma membrane and cytoskeletal elements. This PTP was found to interact with, and dephosphorylate, Fas receptor and IkappaBalpha through the PDZ domains. This suggests it has a role in Fas mediated programmed cell death. This PTP was also shown to interact with GTPase-activating protein, and thus may function as a regulator of Rho signaling pathways. Four alternatively spliced transcript variants, which encode distinct proteins, have been reported. [provided by RefSeq, Oct 2008]

Nucleotide sequence of PTPN13:[NCBI]
Loading Gene Browser...
Protein Sequence
1MHVSLAEALE VRGGPLQEEE IWAVLNQSAE SLQELFRKVS
41LADPAALGFI ISPWSLLLLP SGSVSFTDEN ISNQDLRAFT
81 APEVLQNQS LTSLSDVEKI HIYSLGMTLY WGADYEVPQS
121QPIKLGDHLN SILLGMCEDV IYARVSVRTV LDACSAHIRN
161S NCAPSFSY VKHLVKLVLG NLSGTDQLSC NSEQKPDRSQ
201AIRDRLRGKG LPTGRSSTSD VLDIQKPPLS HQTFLNKGLS
241KS MGFLSIK DTQDENYFKD ILSDNSGRED SENTFSPYQF
281KTSGPEKKPI PGIDVLSKKK IWASSMDLLC TADRDFSSGE
321TAT YRRCHP EAVTVRTSTT PRKKEARYSD GSIALDIFGP
361QKMDPIYHTR ELPTSSAISS ALDRIRERQK KLQVLREAMN
401VEEP VRRYK TYHGDVFSTS SESPSIISSE SDFRQVRRSE
441ASKRFESSSG LPGVDETLSQ GQSQRPSRQY ETPFEGNLIN
481QEIML KRQE EELMQLQAKM ALRQSRLSLY PGDTIKASML
521DITRDPLREI ALETAMTQRK LRNFFGPEFV KMTIEPFISL
561DLPRSI LTK KGKNEDNRRK VNIMLLNGQR LELTCDTKTI
601CKDVFDMVVA HIGLVEHHLF ALATLKDNEY FFVDPDLKLT
641KVAPEGW KE EPKKKTKATV NFTLFFRIKF FMDDVSLIQH
681TLTCHQYYLQ LRKDILEERM HCDDETSLLL ASLALQAEYG
721DYQPEVHG V SYFRMEHYLP ARVMEKLDLS YIKEELPKLH
761NTYVGASEKE TELEFLKVCQ RLTEYGVHFH RVHPEKKSQT
801GILLGVCSK GVLVFEVHNG VRTLVLRFPW RETKKISFSK
841KKITLQNTSD GIKHGFQTDN SKICQYLLHL CSYQHKFQLQ
881MRARQSNQDA QDIERASFR SLNLQAESVR GFNMGRAIST
921GSLASSTLNK LAVRPLSVQA EILKRLSCSE LSLYQPLQNS
961SKEKNDKASW E EKPREMSK SYHDLSQASL YPHRKNVIVN
1001MEPPPQTVAE LVGKPSHQMS RSDAESLAGV TKLNNSKSVA
1041SLNRSPERRK HE SDSSSIE DPGQAYVLGM TMHSSGNSSS
1081QVPLKENDVL HKRWSIVSSP EREITLVNLK KDAKYGLGFQ
1121IIGGEKMGRL DLG IFISSV APGGPADLDG CLKPGDRLIS
1161VNSVSLEGVS HHAAIEILQN APEDVTLVIS QPKEKISKVP
1201STPVHLTNEM KNYM KKSSY MQDSAIDSSS KDHHWSRGTL
1241RHISENSFGP SGGLREGSLS SQDSRTESAS LSQSQVNGFF
1281ASHLGDQTWQ ESQHG SPSP SVISKATEKE TFTDSNQSKT
1321KKPGISDVTD YSDRGDSDMD EATYSSSQDH QTPKQESSSS
1361VNTSNKMNFK TFSSSP PKP GDIFEVELAK NDNSLGISVT
1401GGVNTSVRHG GIYVKAVIPQ GAAESDGRIH KGDRVLAVNG
1441VSLEGATHKQ AVETLRN TG QVVHLLLEKG QSPTSKEHVP
1481VTPQCTLSDQ NAQGQGPEKV KKTTQVKDYS FVTEENTFEV
1521KLFKNSSGLG FSFSREDN L IPEQINASIV RVKKLFPGQP
1561AAESGKIDVG DVILKVNGAS LKGLSQQEVI SALRGTAPEV
1601FLLLCRPPPG VLPEIDTAL LTPLQSPAQV LPNSSKDSSQ
1641PSCVEQSTSS DENEMSDKSK KQCKSPSRRD SYSDSSGSGE
1681DDLVTAPANI SNSTWSSALH QTLSNMVSQ AQSHHEAPKS
1721QEDTICTMFY YPQKIPNKPE FEDSNPSPLP PDMAPGQSYQ
1761PQSESASSSS MDKYHIHHIS E PTRQENWT PLKNDLENHL
1801EDFELEVELL ITLIKSEKGS LGFTVTKGNQ RIGCYVHDVI
1841QDPAKSDGRL KPGDRLIKVN DT DVTNMTH TDAVNLLRAA
1881SKTVRLVIGR VLELPRIPML PHLLPDITLT CNKEELGFSL
1921CGGHDSLYQV VYISDINPRS VAA IEGNLQ LLDVIHYVNG
1961VSTQGMTLEE VNRALDMSLP SLVLKATRND LPVVPSSKRS
2001AVSAPKSTKG NGSYSVGSCS QPAL TPNDS FSTVAGEEIN
2041EISYPKGKCS TYQIKGSPNL TLPKESYIQE DDIYDDSQEA
2081EVIQSLLDVV DEEAQNLLNE NNAAG YSCG PGTLKMNGKL
2121SEERTEDTDC DGSPLPEYFT EATKMNGCEE YCEEKVKSES
2161LIQKPQEKKT DDDEITWGND ELPIER TNH EDSDKDHSFL
2201TNDELAVLPV VKVLPSGKYT GANLKSVIRV LRGLLDQGIP
2241SKELENLQEL KPLDQCLIGQ TKENRRK NR YKNILPYDAT
2281RVPLGDEGGY INASFIKIPV GKEEFVYIAC QGPLPTTVGD
2321FWQMIWEQKS TVIAMMTQEV EGEKIKCQ R YWPNILGKTT
2361MVSNRLRLAL VRMQQLKGFV VRAMTLEDIQ TREVRHISHL
2401NFTAWPDHDT PSQPDDLLTF ISYMRHIHR SGPIITHCSA
2441GIGRSGTLIC IDVVLGLISQ DLDFDISDLV RCMRLQRHGM
2481VQTEDQYIFC YQVILYVLTR LQAEEEQKQQ PQLLK
结构预测来自 AlphaFold DB(UniProt: Q12923),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of PTPN13:           Showing partial SNPs
rs7694723       rs12508626       rs56178389       rs72665771       rs72870617       rs72870619       rs75855193       rs77022006       rs77153955       rs77290511       rs77304420       rs78032824       rs80008502       rs112260269       rs112838413       rs115118554       rs115159823      

Tissue expression of PTPN13:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
GGATCTTCGAGCATTCACTG
59
CTTAATAGGTTGGCTCTGAGG
58
ATCTTTGAGGTTGAACTGGC
59
GTATTCACACCTCCCTTGTC
58
CTCAGAGCCAACCTATTAAGC
58
CTCGAGCGTAAATAACATCCTC
59
ATCTTTGAGGTTGAACTGGC
59
GTATTCACACCTCCCTTGTC
58
ATCCAAAGTGCCTTCTACTCC
60
GCACTGTCTTGCATGTAGG
59
CATCACCTCCTAAGCCTGG
60
TATTCACACCTCCCGTGAC
59
ATCTTTGAGGTTGAACTGGC
59
GTATTCACACCTCCCTTGTC
58
GCATATGTTCTAGATGTGCTACAC
60
CAGTCTTCCCATCTTCTCCC
60
CGTGGAGATTCAGACATGG
58
CACTGAAGAGGAAGATTCCTG
58
AGATGCCCAAGATATTGATGTG
59
AGGTTCACTAAGGTGATCTCC
59
Transcription Factors
Target Gene
Interaction Type
PubMed References
CEBPB
PTPN13
Unknown
NFKB1
PTPN13
Unknown
RELA
PTPN13
Unknown
STAT3
PTPN13
Activation
TP53
PTPN13
Unknown

Subcellular localization of PTPN13 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for PTPN13:

GO ID
Protein
Source DB
GO:0070830
D6R9M4 (UniProtKB)
IEA
GO:0070830
D6R9X4 (UniProtKB)
IEA
GO:0004725
Q12923 (UniProtKB)
IDA
GO:0004725
Q12923 (UniProtKB)
IDA
GO:0004725
Q12923 (UniProtKB)
IMP
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005515
Q12923 (UniProtKB)
IPI
GO:0005634
Q12923 (UniProtKB)
IDA
GO:0005737
Q12923 (UniProtKB)
IDA
GO:0005856
Q12923 (UniProtKB)
IEA
GO:0005886
Q12923 (UniProtKB)
IDA
GO:0006470
Q12923 (UniProtKB)
IDA
GO:0014066
Q12923 (UniProtKB)
IDA
GO:0030027
Q12923 (UniProtKB)
IDA
GO:0035335
Q12923 (UniProtKB)
IMP
GO:0036312
Q12923 (UniProtKB)
IPI
GO:0043005
Q12923 (UniProtKB)
IEA
GO:0044297
Q12923 (UniProtKB)
IEA
GO:0070062
Q12923 (UniProtKB)
IDA
GO:0070062
Q12923 (UniProtKB)
IDA

microRNAs potentially regulating PTPN13:     

String
BioGrid
IntAct
mentha
MINT
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Peripheral Neuropathy 0.120271442 2 0 BeFree_CTD_human
Colorectal Neoplasms 0.007729856 3 0 BeFree_GAD_LHGDN
Mammary Neoplasms 0.005991584 3 0 BeFree_LHGDN
Head and Neck Neoplasms 0.004734064 2 0 GAD
Lupus Erythematosus, Systemic 0.004734064 2 0 GAD
Neoplasm Metastasis 0.003810118 4 0 BeFree_LHGDN
Squamous cell carcinoma 0.002909916 3 1 BeFree_GAD
Esophageal Neoplasms 0.002367032 1 0 GAD
Lung Neoplasms 0.002367032 1 0 GAD
Tobacco Use Disorder 0.002367032 1 0 GAD
Multi-omics analysis identifies key genes and functional loci affecting teat number in American Large White and Landrace pigs and their application in optimizing genomic selection models.
Ma J, Ai X, Hao Y, Yin Y, Liu Q, Yu J, Zhou J, Wang F, Shuai L, Jin Y, Huang R, Zhao Q, Li P BMC Genomics IF: 3.9 2026-06-22
Mesenchymal stem cell-derived extracellular vesicles attenuate liver transplantation-induced ischemia/reperfusion injury by suppressing hepatocellular complement C5 expression.
Liu Y, Xiao J, Wu Z, Zhang F, You Q, Chen H, Zhang J, Yang Y, Wang T, Yi S, Li R, Zheng J J Nanobiotechnology IF: 4.946 2026-05-05
Anti-SIA-cIgG enhances chemotherapy effectiveness through PTPN13-regulated tumor stemness in head and neck squamous cell carcinoma.
Wang L, Xia Y, Liu C, Shan X, Sui Y, Xie S, Cai Z J Transl Int Med IF: 12.5 2026-04-00
PTPN13 Contributes to Ebola Virus-Induced Immune Dysregulation via Dephosphorylation of IRF3 and PI3K-p85.
Warren AN, Gonzalez-Orozco M, Kuzmin I, Parameswaran S, Soto Acosta R, Kalveram B, van Tol S, Hage A, Behera P, Peñaflor-Tellez Y, Giraldo MI, Russell W, Weirauch MT, Freiberg A, Bukreyev A, Rajsbaum R Viruses IF: 3.465 2026-06-30
Dynamic urinary proteomics integrates single-cell and spatial transcriptomics to reveal tumour microenvironment and predict immunotherapy response in biliary tract cancer.
Wang S, Guo Z, Sun B, Liu K, Chao J, Xun Z, Wang Y, Xu Z, Huang Z, Wang H, Tan Y, Zhang N, Piao M, Zhang L, Li C, Li S, Li J, Sun H, Qi F, Wang A, Yang X, Zhu C, Wang H, Sun W, Zhao H Gut IF: 24.6 2026-06-09
CNTN5 Promotes Invasion and Metastasis in Non-Small Cell Lung Cancer by Regulating YAP1 Nuclear Translocation.
Wang J, Wang M, Yin Y, Zeng A, Chen K, Xu Z, Dai J J Gene Med IF: 3.0 2026-09-00
Creation of a Novel Coding Program to Identify Genes Controlled by miRNAs During Human Rhinovirus Infection.
Bosner P, Smith E, Cappleman V, Tomicic A, Alrefaey A, Otele IM, Kyyaly A, Jubrail J Methods Protoc 2025-09-09
[Construction and application of oral squamous cell carcinoma organoid bank].
Xie S, Wang L, Zhang X, Feng Q, Xia Y, Dai Z, Shan X, Cai Z Beijing Da Xue Xue Bao Yi Xue Ban 2025-10-18

Loading comments...

Log in to post comments Log In Sign Up

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]