SLC7A3 (solute carrier family 7 member 3)

symbol
SLC7A3
locus group
protein-coding gene
location
Xq13.1
gene_family
Solute carriers
alias symbol
CAT-3|ATRC3|FLJ14541
alias name
None
entrez id
84889
ensembl gene id
ENSG00000165349
ucsc gene id
uc004dyo.4
refseq accession
NM_032803
hgnc_id
HGNC:11061
approved reserved
1997-12-10
Xq13.1
ChineseEnglish

SLC7A3, a member of the solute carrier family 7 (SLC7), encodes a sodium-independent transporter for cationic amino acids, specifically belonging to the cationic amino acid transporter (CAT) subfamily. This protein facilitates the bidirectional exchange of basic amino acids such as arginine, lysine, and ornithine across the plasma membrane, a process that is mechanistically dependent on the formation of a functional heterodimer with an SLC3 accessory subunit to ensure proper membrane localization and transport activity. Expressed predominantly in the central nervous system—including the cerebral cortex, hippocampus, and hypothalamus—as well as in peripheral tissues like the kidney and intestine, SLC7A3 plays a critical role in maintaining cellular amino acid homeostasis, thereby influencing downstream metabolic pathways including nitric oxide (NO) synthesis, polyamine metabolism, and neurotransmitter balance. Since arginine is the essential substrate for NO production, dysregulation of SLC7A3-mediated arginine uptake can have profound physiological consequences; for instance, reduced transporter activity may limit arginine availability, potentially impairing vascular relaxation, protein synthesis, and immune function, while contributing to neurological conditions such as epilepsy or schizophrenia through disrupted neural signaling. Conversely, overexpression or hyperactivity of SLC7A3 could lead to excessive arginine accumulation and subsequent overproduction of NO, which may trigger oxidative stress and inflammatory responses. Although the specific pathogenic mechanisms associated with SLC7A3 mutations are still being elucidated, its function in modulating cationic amino acid flux positions it as a key regulator in cardiovascular health, neurobiology, and systemic metabolic stability.

Nucleotide sequence of SLC7A3:[NCBI]
Loading Gene Browser...
Protein Sequence
1MPWQAFRRFG QKLVRRRTLE SGMAETRLAR CLSTLDLVAL
41GVGSTLGAGV YVLAGEVAKD KAGPSIVICF LVAALSSVLA
81 GLCYAEFGA RVPRSGSAYL YSYVTVGELW AFTTGWNLIL
121SYVIGTASVA RAWSSAFDNL IGNHISKTLQ GSIALHVPHV
161L AEYPDFFA LGLVLLLTGL LALGASESAL VTKVFTGVNL
201LVLGFVMISG FVKGDVHNWK LTEEDYELAM AELNDTYSLG
241PL GSGGFVP FGFEGILRGA ATCFYAFVGF DCIATTGEEA
281QNPQRSIPMG IVISLSVCFL AYFAVSSALT LMMPYYQLQP
321ESP LPEAFL YIGWAPARYV VAVGSLCALS TSLLGSMFPM
361PRVIYAMAED GLLFRVLARI HTGTRTPIIA TVVSGIIAAF
401MAFL FKLTD LVDLMSIGTL LAYSLVSICV LILRYQPDQE
441TKTGEEVELQ EEAITTESEK LTLWGLFFPL NSIPTPLSGQ
481IVYVC SSLL AVLLTALCLV LAQWSVPLLS GDLLWTAVVV
521LLLLLIIGII VVIWRQPQSS TPLHFKVPAL PLLPLMSIFV
561NIYLMM QMT AGTWARFGVW MLIGFAIYFG YGIQHSLEEI
601KSNQPSRKSR AKTVDLDPGT LYVHSV
Structure predicted by AlphaFold DB(UniProt: Q8WY07). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of SLC7A3:           Showing partial SNPs
rs780435582       rs776340770       rs777382174       rs773048078       rs776243764       rs771753027       rs771695858       rs771749079       rs770435734       rs770733317       rs770139501       rs769936288       rs769062447       rs768510091       rs767700573       rs766232079       rs766507451      

Tissue expression of SLC7A3:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TTCACTTTAAGGTGCCTGC
58
CTGTCATCTGCATCATAAGGT
58
TTCACTTTAAGGTGCCTGC
58
CTGTCATCTGCATCATAAGGT
58
ATGTCATTGGTACAGCCAG
58
GAGTCTTAGAGATGTGGTTCC
58
ATGTCATTGGTACAGCCAG
58
GAGTCTTAGAGATGTGGTTCC
58
TCTCCTATGTCATTGGTACAGC
60
TAGAGATGTGGTTCCCAATCAG
60
TCTCCTATGTCATTGGTACAGC
60
TAGAGATGTGGTTCCCAATCAG
60

Subcellular localization of SLC7A3 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for SLC7A3:

GO ID
Protein
Source DB
GO:0000064
Q8WY07 (UniProtKB)
IBA
GO:0005886
Q8WY07 (UniProtKB)
TAS
GO:0005887
Q8WY07 (UniProtKB)
IBA
GO:0006865
Q8WY07 (UniProtKB)
TAS
GO:0015171
Q8WY07 (UniProtKB)
TAS
GO:0015181
Q8WY07 (UniProtKB)
IBA
GO:0015189
Q8WY07 (UniProtKB)
IBA
GO:0015297
Q8WY07 (UniProtKB)
IBA
GO:0032006
Q8WY07 (UniProtKB)
IEA
GO:1903352
Q8WY07 (UniProtKB)
IBA
GO:1903401
Q8WY07 (UniProtKB)
IEA
GO:1903826
Q8WY07 (UniProtKB)
IEA
GO:1990822
Q8WY07 (UniProtKB)
IEA
String
BioGrid
mentha
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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Cornea plana 0.000271442 1 0 BeFree
The Pathological Roles of Cationic Amino Acid Transporters (CATs) in Cancer.
Myo Oo TT, Saito Y Cancer Sci IF: 0.000 2026-07-12
TP53 mutations in triple-negative breast cancer cells confer sensitivity to ASCT2 inhibition via arginine uptake.
Lyu X, Wei Y, Chen Z, Zou Q, Wang J, Han Y, Xu C, Hu H, Zhou Z, Yuan S, Yang M, Sun L Cell Death Dis IF: 12.2 2026-05-21
Increased SLC7A3 Expression Inhibits Tumor Cell Proliferation and Predicts a Favorable Prognosis in Breast Cancer.
He L, Xu Y, Lin J, Lin SL, Cui Y Recent Pat Anticancer Drug Discov IF: 2.4 2025-00-00
Perturbation of the ovine placental transcriptome occurs at sub-therapeutic exposures to antenatal steroid therapy.
Johnson EL, Usuda H, Carter SWD, Ikeda H, Kumagai Y, Takahashi T, Takahashi Y, Saito Y, Watson HRS, Clarke MW, Ireland DJ, Newnham JP, Saito M, Illanes SE, Sesurajan BP, Choolani MA, Jobe AH, Kemp MW Placenta IF: 3.1 2025-11-00
Effects of autoimmune abnormalities on fertility and placental morphology in mice.
Yamanaka R, Ichii O, Nakamura T, Otani Y, Namaba T, Kon Y Autoimmunity IF: 4.3 2024-00-00
SIRPA enhances osteosarcoma metastasis by stabilizing SP1 and promoting SLC7A3-mediated arginine uptake.
Wang P, Song Y, Li H, Zhuang J, Shen X, Yang W, Mi R, Lu Y, Yang B, Ma M, Shen H Cancer Lett IF: 11.8 2023-11-01
A comprehensive analysis of the diagnostic and prognostic value associated with the SLC7A family members in breast cancer.
Yan L, He J, Liao X, Liang T, Zhu J, Wei W, He Y, Zhou X, Peng T Gland Surg IF: 1.9 2022-02-00
Gain-of-function genetic screens in human cells identify SLC transporters overcoming environmental nutrient restrictions.
Rebsamen M, Girardi E, Sedlyarov V, Scorzoni S, Papakostas K, Vollert M, Konecka J, Guertl B, Klavins K, Wiedmer T, Superti-Furga G Life Sci Alliance 2022-00-00
SLC7A3: In Silico Prediction of a Potential New Cause of Childhood Epilepsy.
Sourbron J, Jansen K, Mei D, Hammer TB, Møller RS, Gold NB, O'Grady L, Guerrini R, Lagae L Neuropediatrics IF: 1.3 2022-00-00

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