SLC7A4 (solute carrier family 7 member 4)

symbol
SLC7A4
locus group
protein-coding gene
location
22q11.21
gene_family
Solute carriers
alias symbol
HCAT3|CAT-4|VH
alias name
None
entrez id
6545
ensembl gene id
ENSG00000099960
ucsc gene id
uc002zud.3
refseq accession
NM_004173
hgnc_id
HGNC:11062
approved reserved
1997-12-09
22q11.21
ChineseEnglish

SLC7A4, also known as solute carrier family 7 member 4, encodes a sodium-dependent cationic amino acid transporter (CAT-4) that belongs to the SLC7 gene family, a group of proteins primarily responsible for the transmembrane transport of neutral and cationic amino acids. As a typical member of this family, SLC7A4 functions as a heavy chain that heterodimerizes with a light chain partner, such as SLC3A2, to form a functional transport complex capable of mediating the uptake of substrates like arginine and lysine. The protein is predicted to possess twelve transmembrane domains and exhibits a tissue-specific expression profile, with high levels detected in the placenta, testis, and brain, suggesting critical roles in reproductive physiology, neurotransmission, and immune regulation. By facilitating the cellular influx of cationic amino acids, SLC7A4 likely influences downstream signaling pathways, including the mechanistic target of rapamycin (mTOR) pathway, which is pivotal for cell growth and proliferation. Although direct pathogenic links to SLC7A4 mutations remain uncharacterized, functional loss in this gene could compromise amino acid supply in vital tissues such as the placenta, potentially leading to developmental abnormalities, while overexpression might disrupt intracellular amino acid homeostasis. The broader SLC7 family is associated with metabolic disorders such as cystinuria and lysinuric protein intolerance, highlighting the importance of precise amino acid transport regulation; consequently, further investigation into SLC7A4 is warranted to elucidate its specific contributions to pregnancy maintenance and neural function.

Nucleotide sequence of SLC7A4:[NCBI]
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Protein Sequence
1MARGLPTIAS LARLCQKLNR LKPLEDSTME TSLRRCLSTL
41DLTLLGVGGM VGSGLYVLTG AVAKEVAGPA VLLSFGVAAV
81 ASLLAALCY AEFGARVPRT GSAYLFTYVS MGELWAFLIG
121WNVLLEYIIG GAAVARAWSG YLDSMFSHSI RNFTETHVGS
161W QVPLLGHY PDFLAAGIIL LASAFVSCGA RVSSWLNHTF
201SAISLLVILF IVILGFILAQ PHNWSADEGG FAPFGFSGVM
241AG TASCFYA FVGFDVIAAS SEEAQNPRRS VPLAIAISLA
281IAAGAYILVS TVLTLMVPWH SLDPDSALAD AFYQRGYRWA
321GFI VAAGSI CAMNTVLLSL LFSLPRIVYA MAADGLFFQV
361FAHVHPRTQV PVAGTLAFGL LTAFLALLLD LESLVQFLSL
401GTLL AYTFV ATSIIVLRFQ KSSPPSSPGP ASPGPLTKQQ
441SSFSDHLQLV GTVHASVPEP GELKPALRPY LGFLDGYSPG
481AVVTW ALGV MLASAITIGC VLVFGNSTLH LPHWGYILLL
521LLTSVMFLLS LLVLGAHQQQ YREDLFQIPM VPLIPALSIV
561LNICLM LKL SYLTWVRFSI WLLMGLAVYF GYGIRHSKEN
601QRELPGLNST HYVVFPRGSL EETVQAMQPP SQAPAQDPGH
641ME
Structure predicted by AlphaFold DB(UniProt: O43246). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of SLC7A4:           Showing partial SNPs
rs407062       rs2520666       rs2541956       rs5752500       rs77254876       rs113928239       rs140059778       rs144512579       rs149268553       rs182653082       rs183799425       rs183992622       rs187426267       rs187575586       rs191963566       rs374677501       rs528660713      

Tissue expression of SLC7A4:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CTGAGTCACAGTCACAGGG
60
GTTCAGCTTCTGGCATAAGC
60
GGGAAGACTTATTTCAGATCCC
58
AAGTTTCAGCATGAGGCAG
59
GGGAAGACTTATTTCAGATCCC
58
AAGTTTCAGCATGAGGCAG
59
TCAACATCTGCCTCATGCT
59
TACACTGCAAGTCCCATCAG
60
ACTGAGTCACAGTCACAGG
59
TTCAGCTTCTGGCATAAGC
58
TCAACATCTGCCTCATGCT
59
TACACTGCAAGTCCCATCAG
60
CAACATCTGCCTCATGCTG
59
TACACTGCAAGTCCCATCAG
60
CAACATCTGCCTCATGCTG
59
TACACTGCAAGTCCCATCAG
60
CTGAGTCACAGTCACAGGG
60
TTCAGCTTCTGGCATAAGC
58

Subcellular localization of SLC7A4 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for SLC7A4:

GO ID
Protein
Source DB
GO:0003333
C9JM63 (UniProtKB)
IEA
GO:0015171
C9JM63 (UniProtKB)
IEA
GO:0016021
C9JM63 (UniProtKB)
IEA
GO:0005887
O43246 (UniProtKB)
IBA
GO:0006520
O43246 (UniProtKB)
TAS
GO:0006810
O43246 (UniProtKB)
TAS
GO:0015174
O43246 (UniProtKB)
TAS
GO:0015179
O43246 (UniProtKB)
IBA
GO:0015297
O43246 (UniProtKB)
IBA
GO:0016021
O43246 (UniProtKB)
TAS
GO:1902475
O43246 (UniProtKB)
IEA
GO:1990822
O43246 (UniProtKB)
IEA
String
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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Chronic Lymphocytic Leukemia 0.016286512 60 0 BeFree
Lymphoma 0.005157396 19 0 BeFree
Mucosa-Associated Lymphoid Tissue Lymphoma 0.004071628 15 0 BeFree
Multiple Myeloma 0.003800186 14 0 BeFree
Rheumatoid Arthritis 0.002985861 11 0 BeFree
Diffuse Large B-Cell Lymphoma 0.002985861 11 0 BeFree
Lymphoma, Follicular 0.002714419 10 0 BeFree
HIV Infections 0.002714419 10 0 BeFree
Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse 0.002442977 9 0 BeFree
Lupus Erythematosus, Systemic 0.002171535 8 0 BeFree
Structural basis for pH-responsive amino acid transport via SLC7A4.
Kolokouris D, Bothra A, Kato T, Zeng YC, Lichtinger S, Parker JL, Biggin PC, Newstead S Nat Commun IF: 12.124 2026-03-28
The Pathological Roles of Cationic Amino Acid Transporters (CATs) in Cancer.
Myo Oo TT, Saito Y Cancer Sci IF: 0.000 2026-07-12
Depressive symptoms in mid-pregnancy are associated with DNA methylation marks in the placenta.
Pettersson N, Kyläniemi MK, Kaukonen R, Konki M, Scheinin NM, Kortesluoma S, Karlsson L, Karlsson H, Lund R, Ekholm E Placenta IF: 3.1 2026-08-00
Obesity alters testicular gene expression in mice, monkeys and humans.
Shao W, Li W, Yuan X, Zhang H, Zhao J Zygote IF: 1.7 2025-04-00
Multi-Omics Reveals the Effect of Crossbreeding on Some Precursors of Flavor and Nutritional Quality of Pork.
Chen Q, Zhang W, Xiao L, Sun Q, Wu F, Liu G, Wang Y, Pan Y, Wang Q, Zhang J Foods 2023-08-28
Exome Survey and Candidate Gene Re-Sequencing Identifies Novel Exstrophy Candidate Genes and Implicates LZTR1 in Disease Formation.
Köllges R, Stegmann J, Schneider S, Waffenschmidt L, Fazaal J, Breuer K, Hilger AC, Dworschak GC, Mingardo E, Rösch W, Hofmann A, Neissner C, Ebert AK, Stein R, Younsi N, Hirsch-Koch K, Schmiedeke E, Zwink N, Jenetzky E, Thiele H, Ludwig KU, Reutter H Biomolecules 2023-00-13
Detection of Selection Signatures in Anqing Six-End-White Pigs Based on Resequencing Data.
Chen Y, Wu X, Wang J, Hou Y, Liu Y, Wang B, Hu X, Zheng X, Zhang X, Ding Y, Yin Z Genes (Basel) IF: 3.600 2022-00-08
A novel prognostic model for prostate cancer based on androgen biosynthetic and catabolic pathways.
Fan A, Zhang Y, Cheng J, Li Y, Chen W Front Oncol IF: 3.4 2022-00-00

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