SEC63 (SEC63 homolog, protein translocation regulator)

symbol
SEC63
locus group
protein-coding gene
location
6q21
gene_family
DNAJ (HSP40) heat shock proteins
alias symbol
SEC63L|PRO2507|ERdj2|DNAJC23
alias name
None
entrez id
11231
ensembl gene id
ENSG00000025796
ucsc gene id
uc003psc.5
refseq accession
NM_007214
hgnc_id
HGNC:21082
approved reserved
2003-05-15
6q21
ChineseEnglish

SEC63 encodes an endoplasmic reticulum (ER) transmembrane protein that serves as a critical component of the protein translocation machinery and the ER-associated degradation (ERAD) pathway. As a member of the SEC63 gene family, characterized by conserved J-domains and transmembrane regions, the SEC63 protein interacts directly with the SEC61 translocon channel to facilitate the co-translational translocation of nascent polypeptide chains into the ER lumen, where they undergo proper folding and post-translational modifications. Its J-domain enables binding to the ER chaperone BiP (HSPA5), thereby regulating ATP hydrolysis to drive the folding process and maintain protein homeostasis. Dysregulation of SEC63 function has significant pathological implications; mutations in this gene are strongly associated with autosomal dominant polycystic kidney disease (ADPKD), where defective protein folding triggers ER stress and subsequent cyst formation. Additionally, SEC63 variants have been linked to hepatic conditions such as liver fibrosis and congenital hepatic fibrosis. While moderate overexpression of SEC63 may enhance ER folding capacity and alleviate stress, excessive activity can paradoxically lead to the accumulation of misfolded proteins. Conversely, reduced SEC63 expression impairs protein translocation and folding, activating the unfolded protein response (UPR) and potentially leading to apoptosis if chronic. Collectively, SEC63 plays a pivotal role in ER protein quality control, and its functional integrity is essential for maintaining cellular homeostasis and organ function.

Nucleotide sequence of SEC63:[NCBI]
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Protein Sequence
1MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN
41AEQIRLKNIR KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL
81 AGWALFLFL AYKVSKTDRE YQEYNPYEVL NLDPGATVAE
121IKKQYRLLSL KYHPDKGGDE VMFMRIAKAY AALTDEESRK
161N WEEFGNPD GPQATSFGIA LPAWIVDQKN SILVLLVYGL
201AFMVILPVVV GSWWYRSIRY SGDQILIRTT QIYTYFVYKT
241RN MDMKRLI MVLAGASEFD PQYNKDATSR PTDNILIPQL
281IREIGSINLK KNEPPLTCPY SLKARVLLLS HLARMKIPET
321LEE DQQFML KKCPALLQEM VNVICQLIVM ARNREEREFR
361APTLASLENC MKLSQMAVQG LQQFKSPLLQ LPHIEEDNLR
401RVSN HKKYK IKTIQDLVSL KESDRHTLLH FLEDEKYEEV
441MAVLGSFPYV TMDIKSQVLD DEDSNNITVG SLVTVLVKLT
481RQTMA EVFE KEQSICAAEE QPAEDGQGET NKNRTKGGWQ
521QKSKGPKKTA KSKKKKPLKK KPTPVLLPQS KQQKQKQANG
561VVGNEA AVK EDEEEVSDKG SDSEEEETNR DSQSEKDDGS
601DRDSDREQDE KQNKDDEAEW QELQQSIQRK ERALLETKSK
641ITHPVYS LY FPEEKQEWWW LYIADRKEQT LISMPYHVCT
681LKDTEEVELK FPAPGKPGNY QYTVFLRSDS YMGLDQIKPL
721KLEVHEAK P VPENHPQWDT AIEGDEDQED SEGFEDSFEE
761EEEEEEDDD
Structure predicted by AlphaFold DB(UniProt: Q9UGP8). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of SEC63:           Showing partial SNPs
rs1826       rs483977       rs485736       rs488399       rs494630       rs499181       rs503068       rs505386       rs510273       rs513325       rs547372       rs550101       rs554262       rs556907       rs557911       rs570558       rs579120      
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
AAATTTGGATCCTGGAGCC
58
TCATCACCTCCTTTATCTGGA
58
TAGAGCTGAAGTTTCCTGCA
59
CATGAACTTCCAACTTCAATGG
58
GAATGCCGAGCAAATTCGA
59
ATAAGAACAATGCCCATCCTG
59
ACACCTGTGCTATTACCAC
57
CTTTACTGCAGCTTCATTCC
57
AGCCTTTACTTTCCTGAGGA
58
CTTCAGCTCTACCTCCTCTG
59
ATACAGAGGAGGTAGAGCTG
57
AGTCTGATCTCAGAAACACAG
57
GCTTCTGAATTTGATCCTCAG
57
GCCAATTTCTCTGATTAGCTG
57
GGCGACATACTACCTCTGG
59
CTGGGTAAATGAGACTCTCCC
60
GGCGACATACTACCTCTGG
59
CTGGGTAAATGAGACTCTCCC
60
GAAGAGGTTATGGCTGTCCT
59
GCTATCTTCATCATCTAACACCTG
59

Subcellular localization of SEC63 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for SEC63:

GO ID
Protein
Source DB
GO:0016021
A6PVC9 (UniProtKB)
IEA
GO:0016021
F8WB27 (UniProtKB)
IEA
GO:0001889
Q9UGP8 (UniProtKB)
IEA
GO:0004872
Q9UGP8 (UniProtKB)
TAS
GO:0005515
Q9UGP8 (UniProtKB)
IPI
GO:0005783
Q9UGP8 (UniProtKB)
TAS
GO:0005789
Q9UGP8 (UniProtKB)
TAS
GO:0005829
Q9UGP8 (UniProtKB)
TAS
GO:0006612
Q9UGP8 (UniProtKB)
TAS
GO:0006614
Q9UGP8 (UniProtKB)
IMP
GO:0006620
Q9UGP8 (UniProtKB)
IMP
GO:0006807
Q9UGP8 (UniProtKB)
IEA
GO:0010259
Q9UGP8 (UniProtKB)
IEA
GO:0016020
Q9UGP8 (UniProtKB)
IDA
GO:0016021
Q9UGP8 (UniProtKB)
IEA
GO:0036498
Q9UGP8 (UniProtKB)
TAS
GO:0044822
Q9UGP8 (UniProtKB)
IDA
GO:0072001
Q9UGP8 (UniProtKB)
IEA

microRNAs potentially regulating SEC63:     

String
BioGrid
IntAct
mentha
MINT
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Polycystic liver disease 0.442985861 12 3 BeFree_CLINVAR_CTD_human_MGD_ORPHANET
Polycystic Kidney Diseases 0.120271442 2 0 BeFree_CTD_human
Liver diseases 0.005091382 2 0 GAD_LHGDN
Cyst 0.003181358 4 0 BeFree_GAD
Liver cyst 0.000542884 2 0 BeFree
Polycystic Kidney, Autosomal Dominant 0.000271442 1 0 BeFree
Cardiomyopathy, Familial Idiopathic 0.000271442 1 0 BeFree
Genetic Analysis of Isolated Hepatic Ductal Plate Malformation Reveals Novel Variants and Insights into Phenotypic Correlation.
Bhuva M, Thompson E, Watson CM, Sava F, Griffiths WJH Dig Dis Sci IF: 2.8 2026-06-28
Transplant Indications in Polycystic Liver and Kidney Disease.
Perez-Prado S, Suddle A Turk J Gastroenterol IF: 1.6 2026-05-20
Hydrophobicity and signal sequence binding to the Sec complex: A single molecule biophysical perspective.
Sánchez WN, Robeson L, Alfaro-Valdés HM, Tych K, Matute RA, Driessen AJM, Wilson CAM Biochem Biophys Res Commun IF: 2.5 2026-09-24
Reprogrammed Lipid Metabolism as a Gatekeeper of Hepatocarcinogenesis: from Enzyme Regulation to Precision Therapy.
Yang L, Yang J, Xiong Z, Wei J, Jiang X, Ye H, Li Y Curr Oncol Rep IF: 5.2 2026-02-05
Monogenic kidney disease and monogenic diabetes are present in renal clinic patients with non-genetic diagnoses.
Huang M, Pianta T, Barit D, Mahmood K, Colville D, Mack H, Savige J Sci Rep IF: 4.9 2026-05-15
Proteomic Profiling of Non-Muscle Invasive Bladder Cancer Reveals Potential Biomarkers for Recurrence and Progression Risk.
Silva TA, Viana LG, Carvalho VM, Bertolla RP, Antoniassi MP, Azevedo H J Proteome Res IF: 3.8 2026-01-26
Pleomorphic adenoma and carcinoma ex-pleomorphic adenoma tumorigenesis: A proteomic analysis.
Zanella VG, Costa SFDS, Schuch LF, Pilar EFS, Paes Leme AF, Dos Santos JN, Khurram SA, Elalawy F, Bingle L, Nunes FD, Fonseca FP, Vargas PA, Martins MD, Wagner VP Oral Dis IF: 3.1 2025-03-00
PEX3 gene knockout influences recombinant xylanase expression by Komagataella phaffii.
Zhou Z, Cong W, Wang M, Zhou H, Zhang J Synth Syst Biotechnol IF: 4.8 2025-09-00

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