Abstract
Indole-3-acetic acid (IAA) can be oxidized via two mechanisms: a conventional hydrogen-peroxide-dependent pathway, and one that is hydrogen-peroxide-independent and requires oxygen. It has been shown here for the first time that only plant peroxidases are able to catalyse the reaction of IAA oxidation with molecular oxygen. Cytochrome c peroxidase (CcP), fungal peroxidases (manganese-dependent peroxidase, lignin peroxidase and Arthromyces ramosus peroxidase) and microperoxidase were essentially inactive towards IAA in the absence of added H2O2. An analysis of amino acid sequences allowed five structurally similar fragments to be identified in auxin-binding proteins and plant peroxidases. The corresponding fragments in CcP and fungal peroxidases showed no similarity with auxin-binding proteins. Five structurally similar fragments form a subdomain including the catalytic centre and two residues highly conserved among 'classical' plant peroxidases only, namely His-40 and Trp-117. The subdomain identified above with the two residues might be responsible for the oxidation of the physiological substrate of classical plant peroxidases, IAA.
MeSH Terms
Amino Acid Sequence
Catalytic Domain
Chromatography, High Pressure Liquid
Conserved Sequence/genetics,physiology
Fungal Proteins/chemistry,metabolism
Hemeproteins/chemistry,metabolism
Hydrogen Peroxide/metabolism
Hydrogen-Ion Concentration
Indoleacetic Acids/metabolism
Kinetics
Models, Molecular
Molecular Sequence Data
Oxidants/metabolism
Oxidation-Reduction
Oxygen/metabolism
Peroxidases/chemistry,metabolism
Plant Growth Regulators
Plant Proteins
Plants/enzymology
Protein Conformation
Receptors, Cell Surface
Structure-Activity Relationship
Chemicals
Fungal Proteins
Hemeproteins
Indoleacetic Acids
Oxidants
Plant Growth Regulators
Plant Proteins
Receptors, Cell Surface
auxin receptor, plant
indoleacetic acid
Hydrogen Peroxide
Peroxidases
Oxygen
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Savitsky P A
Department of Chemical Enzymology, Chemical Faculty, Moscow State University, Moscow 119899 GSP, Russia.
Gazaryan I G
Tishkov V I
Lagrimini L M
Ruzgas T
Gorton L
References (18)
18 references, click to expand
-
Three-dimensional structure of a recombinant peroxidase from Coprinus cinereus at 2.6 A resolution.
FEBS Lett. 1994 Feb 21;339(3):291-6
PMID: 8112469
-
Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 A resolution. Structural comparisons with the lignin and cytochrome c peroxidases.
J Mol Biol. 1994 Jan 7;235(1):331-44
PMID: 8289254
-
Anaerobic stopped-flow studies of indole-3-acetic acid oxidation by dioxygen catalysed by horseradish C and anionic tobacco peroxidase at neutral pH: catalase effect.
Biophys Chem. 1998 Jun 9;72(3):231-7
PMID: 17029711
-
The X-ray crystal structure of the membrane protein prostaglandin H2 synthase-1.
Nature. 1994 Jan 20;367(6460):243-9
PMID: 8121489
-
Phytohormone control of the tobacco anionic peroxidase promoter.
Plant Mol Biol. 1996 Jun;31(3):565-73
PMID: 8790289
-
The crystal structure of peanut peroxidase.
Structure. 1996 Mar 15;4(3):311-21
PMID: 8805539
-
Basic local alignment search tool.
J Mol Biol. 1990 Oct 5;215(3):403-10
PMID: 2231712
-
Crystal structure of yeast cytochrome c peroxidase refined at 1.7-A resolution.
J Biol Chem. 1984 Nov 10;259(21):13027-36
PMID: 6092361
-
Evidence for a free radical chain mechanism in the reaction between peroxidase and indole-3-acetic acid at neutral pH.
Biophys Chem. 1996 Feb 8;58(3):325-34
PMID: 17023361
-
Crystal structure of horseradish peroxidase C at 2.15 A resolution.
Nat Struct Biol. 1997 Dec;4(12):1032-8
PMID: 9406554
-
Mechanism of indole-3-acetic acid oxidation by plant peroxidases: anaerobic stopped-flow spectrophotometric studies on horseradish and tobacco peroxidases.
Biochem J. 1996 Feb 1;313 ( Pt 3):841-7
PMID: 8611164
-
Spectral properties of the higher oxidation states of prostaglandin H synthase.
J Biol Chem. 1985 Dec 5;260(28):14894-6
PMID: 3934150
-
Identification of skatolyl hydroperoxide and its role in the peroxidase-catalysed oxidation of indol-3-yl acetic acid.
Biochem J. 1998 Jul 1;333 ( Pt 1):223-32
PMID: 9639583
-
Chemiluminescence in L-tyrosine-H2O2-horseradish peroxidase system: possible formation of tyrosine cation radical.
Biochem Biophys Res Commun. 1985 Apr 30;128(2):936-41
PMID: 3994728
-
Purification and unusual kinetic properties of a tobacco anionic peroxidase.
Phytochemistry. 1996 Mar;41(4):1029-34
PMID: 8728713
-
The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06-A resolution.
J Biol Chem. 1994 Dec 30;269(52):32759-67
PMID: 7806497
-
Crystallographic refinement of lignin peroxidase at 2 A.
J Biol Chem. 1993 Feb 25;268(6):4429-40
PMID: 8440725
-
PEROXIDASE-CATALYZED OXIDATION OF INDOLE-3-ACETIC ACID.
Biochemistry. 1965 Jan;4:144-58
PMID: 14285232