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PMID: 10384043 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Analysis of major repetitive DNA sequences in the dog (Canis familiaris) genome.

Mammalian genome : official journal of the International Mammalian Genome Society ·Vol. 10 ·No. 7 ·1999-07-00 ·Pages 699-705

Bentolila S, Bach JM, Kessler JL, Bordelais I, Cruaud C, Weissenbach J, Panthier JJ

Abstract

A systematic screening and analysis of repeated DNA sequences from a dog genomic library composed of small DNA inserts enabled us to characterize abundant canine repetitive DNA families. Four main families were identified: i) a group of highly repeated tRNA-derived short interspersed repetitive DNA elements (tRNA-SINEs); ii) another type of SINE-like element that was mainly found inserted into long interspersed repetitive elements (LINEs); iii) LINEs of the L1 type; and iv) satellite or satellite-like DNA. Surprisingly, no SINEs derived from 7SL RNA were found in the dog genome. These data should help in the analysis of canine DNA sequences and in the design of canine genome mapping reagents.

MeSH Terms
Animals Base Sequence DNA, Satellite/genetics Dogs/genetics Genome Long Interspersed Nucleotide Elements Molecular Sequence Data Nucleic Acid Hybridization RNA, Transfer/genetics Sequence Homology, Nucleic Acid Short Interspersed Nucleotide Elements
Chemicals
DNA, Satellite RNA, Transfer
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Bentolila S
Genethon, CNRS URA-1922, 1 rue de l'Internationale, 91002 Evry Cedex, France.
Bach J M
Kessler J L
Bordelais I
Cruaud C
Weissenbach J
Panthier J J
Article Info
Journal
Mammalian genome : official journal of the International Mammalian Genome Society
Abbr.
Mamm Genome
ISSN
0938-8990
DOI
10.1007/s003359901074
Published
1999-07-00
Pages
699-705
Language
English
Region
United States
NLM ID
9100916
Subset
IM
Databases
GENBANK
AJ239522, AJ239523, AJ239524, AJ239525, AJ239527, AJ239528, AJ239529, AJ239530, AJ239531, AJ239532, AJ239533, AJ239534, AJ239535, AJ239537, AJ239538, AJ239539, AJ239541, AJ239542, AJ239543, AJ239544, AJ239545, AJ239546, AJ239548, AJ239549
External Links
PubMed source DOI: 10.1007/s003359901074 View journal details
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