Home LiteratureArticle Details
PMID: 10501969 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Functional analysis and chromosomal mapping of Gata5, a gene encoding a zinc finger DNA-binding protein.

Nemer G, Qureshi ST, Malo D, Nemer M

Abstract

The GATA family of zinc finger proteins are transcriptional regulators with critical functions in lineage differentiation and embryonic development. Based on structural and expression pattern comparisons, the GATA proteins have been subdivided into two groups. The first subgroup consists of GATA-1, -2, and -3, which are all highly expressed in the hematopoietic system, whereas GATA-4, -5, and -6 are present essentially in the heart and gut. We have isolated and functionally characterized the rat GATA-5 cDNA, which encodes a 45-kDa protein with 71%, 73%, and 97% homology to its amphibian, avian, and murine homologs, respectively. Northern blot analysis showed that rat GATA-5 is expressed in a dynamic pattern during embryonic and postnatal development. In the midgestation embryo, GATA-5 transcripts are most abundant in the heart and decrease dramatically in the postnatal heart; in contrast, GATA-5 expression is upregulated in the lung and gut during postnatal development. Functional studies with recombinant GATA-4, -5, and -6 proteins show that GATA-5 has preferential affinity for a subset of GATA elements found on cardiac promoters and differentially activate cardiac gene transcription. Structure-function analysis revealed the presence of an activation domain within the carboxy terminal region of GATA-5 that is essential for transcriptional regulation of target promoters. Linkage analysis localized Gata5 to distal mouse Chromosome (Chr) 2 in a conserved linkage group with genes localized to rat Chr 3q43 and human Chr 20q13.2-q13.3. The results suggest that GATA-5 may have specific downstream targets and that GATA-4, -5, and -6 can only partially substitute for each other in cardiogenesis. Thus, Gata5 probably plays a specialized evolutionary conserved role in cardiac development.

MeSH Terms
Amino Acid Sequence Animals Cell Differentiation/genetics Cell Line Chromosome Mapping Chromosomes, Human, Pair 20 Cloning, Molecular DNA-Binding Proteins/chemistry,genetics GATA5 Transcription Factor Gene Expression Regulation, Developmental Genetic Linkage Humans Mice Molecular Sequence Data Myocardium/metabolism RNA, Messenger/metabolism Rats Rats, Sprague-Dawley Recombinant Proteins Reverse Transcriptase Polymerase Chain Reaction Sequence Homology, Amino Acid Transcription Factors/chemistry,genetics Transcriptional Activation Zinc Fingers/genetics
Chemicals
DNA-Binding Proteins GATA5 Transcription Factor GATA5 protein, human Gata5 protein, mouse Gata5 protein, rat RNA, Messenger Recombinant Proteins Transcription Factors
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Nemer G
Laboratoire de développement et différenciation cardiaques, Institut de recherches cliniques de Montréal, 110 des Pins Ouest, Montréal, Québec, Canada H2W 1R7.
Qureshi S T
Malo D
Nemer M
Article Info
Journal
Mammalian genome : official journal of the International Mammalian Genome Society
Abbr.
Mamm Genome
ISSN
0938-8990
Published
1999-10-00
Pages
993-9
Language
English
Region
United States
NLM ID
9100916
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]