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PMID: 10592252 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

ASDB: database of alternatively spliced genes.

Nucleic acids research ·Vol. 28 ·No. 1 ·2000-01-01 ·Pages 296-7

Dralyuk I, Brudno M, Gelfand MS, Zorn M, Dubchak I

Abstract

Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to alternatively spliced variants of one gene. The DNA division consists of complete genes with alternative splicing mentioned or annotated in GenBank. The search engine allows one to search over SWISS-PROT and GenBank fields and then follow the links to all variants. The database can be assessed at the URL http://cbcg.nersc.gov/asdb

MeSH Terms

Alternative Splicing/genetics DNA/genetics Databases, Factual Internet Proteins/chemistry,genetics

Chemicals

Proteins DNA

Authors & Affiliations

5 authors, click to expand affiliations / ORCID

Dralyuk I

National Energy Research Scientific Computing Center, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

Brudno M

Gelfand M S

Zorn M

Dubchak I

References (2)

2 references, click to expand

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
Nucleic Acids Res. 1997 Dec 15;25(24):4876-82 PMID: 9396791
ASDB: database of alternatively spliced genes.
Nucleic Acids Res. 1999 Jan 1;27(1):301-2 PMID: 9847209

Article Info

Journal

Nucleic acids research

Abbr.

Nucleic Acids Res

ISSN

0305-1048

DOI

10.1093/nar/28.1.296

Published

2000-01-01

Pages

296-7

Language

English

Region

England

NLM ID

0411011

PMCID

PMC102426

Subset

External Links

PubMed source DOI: 10.1093/nar/28.1.296 PMC Full Text View journal details

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ASDB: database of alternatively spliced genes.

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