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PMID: 10888679 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Luv1p/Rki1p/Tcs3p/Vps54p, a yeast protein that localizes to the late Golgi and early endosome, is required for normal vacuolar morphology.

Molecular biology of the cell ·Vol. 11 ·No. 7 ·2000-07-00 ·Pages 2429-43

Conboy MJ, Cyert MS

Abstract

We have characterized LUV1/RKI1/TCS3/VPS54, a novel yeast gene required to maintain normal vacuolar morphology. The luv1 mutant was identified in a genetic screen for mutants requiring the phosphatase calcineurin for vegetative growth. luv1 mutants lack a morphologically intact vacuole and instead accumulate small vesicles that are acidified and contain the vacuolar proteins alkaline phosphatase and carboxypeptidase Y and the vacuolar membrane H(+)-ATPase. Endocytosis appears qualitatively normal in luv1 mutants, but some portion (28%) of carboxypeptidase Y is secreted. luv1 mutants are sensitive to several ions (Zn(2+), Mn(2+), and Cd(2+)) and to pH extremes. These mutants are also sensitive to hygromycin B, caffeine, and FK506, a specific inhibitor of calcineurin. Some vacuolar protein-sorting mutants display similar drug and ion sensitivities, including sensitivity to FK506. Luv1p sediments at 100,000 x g and can be solubilized by salt or carbonate, indicating that it is a peripheral membrane protein. A Green Fluorescent Protein-Luv1 fusion protein colocalizes with the dye FM 4-64 at the endosome, and hemagglutinin-tagged Luv1p colocalizes with the trans-Golgi network/endosomal protease Kex2p. Computer analysis predicts a short coiled-coil domain in Luv1p. We propose that this protein maintains traffic through or the integrity of the early endosome and that this function is required for proper vacuolar morphology.

MeSH Terms
Amino Acid Sequence Calcineurin/metabolism Carrier Proteins/genetics,metabolism Cell Compartmentation Chemical Fractionation Cloning, Molecular Endosomes/metabolism Fungal Proteins/genetics,metabolism Genes, Fungal Golgi Apparatus/metabolism Green Fluorescent Proteins Luminescent Proteins/genetics,metabolism Molecular Sequence Data Mutagenesis Proprotein Convertases Saccharomyces cerevisiae/genetics,growth & development,metabolism,physiology Saccharomyces cerevisiae Proteins Subtilisins/metabolism Vacuoles/physiology Vesicular Transport Proteins
Chemicals
Carrier Proteins Fungal Proteins Luminescent Proteins Saccharomyces cerevisiae Proteins VPS54 protein, S cerevisiae Vesicular Transport Proteins Green Fluorescent Proteins Calcineurin Proprotein Convertases Subtilisins KEX2 protein, S cerevisiae
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Conboy M J
Department of Biological Sciences, Stanford University, Stanford, California 94305-5020, USA.
Cyert M S
References (83)
83 references, click to expand
  1. Retrieval of resident late-Golgi membrane proteins from the prevacuolar compartment of Saccharomyces cerevisiae is dependent on the function of Grd19p.
    J Cell Biol. 1998 Feb 9;140(3):577-90 PMID: 9456318
  2. Characterization of new vacuolar segregation mutants, isolated by screening for loss of proteinase B self-activation.
    Eur J Cell Biol. 1996 Nov;71(3):237-47 PMID: 8929562
  3. A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast.
    J Cell Biol. 1998 Aug 10;142(3):665-81 PMID: 9700157
  4. Calcium triggers calcineurin-dependent synaptic vesicle recycling in mammalian nerve terminals.
    Curr Biol. 1998 Jun 18;8(13):740-9 PMID: 9651678
  5. Promiscuity in Rab-SNARE interactions.
    Mol Biol Cell. 1999 Dec;10(12):4149-61 PMID: 10588649
  6. Sec6, Sec8, and Sec15 are components of a multisubunit complex which localizes to small bud tips in Saccharomyces cerevisiae.
    J Cell Biol. 1995 Jul;130(2):299-312 PMID: 7615633
  7. The fungal vacuole: composition, function, and biogenesis.
    Microbiol Rev. 1990 Sep;54(3):266-92 PMID: 2215422
  8. Protein transport to the yeast vacuole.
    Curr Opin Cell Biol. 1995 Aug;7(4):544-51 PMID: 7495575
  9. The Saccharomyces cerevisiae genes (CMP1 and CMP2) encoding calmodulin-binding proteins homologous to the catalytic subunit of mammalian protein phosphatase 2B.
    Mol Gen Genet. 1991 May;227(1):52-9 PMID: 1646387
  10. Characterization of genes required for protein sorting and vacuolar function in the yeast Saccharomyces cerevisiae.
    EMBO J. 1989 Jul;8(7):2057-65 PMID: 2676511
  11. Tcn1p/Crz1p, a calcineurin-dependent transcription factor that differentially regulates gene expression in Saccharomyces cerevisiae.
    Genes Dev. 1997 Dec 15;11(24):3445-58 PMID: 9407036
  12. Ion tolerance of Saccharomyces cerevisiae lacking the Ca2+/CaM-dependent phosphatase (calcineurin) is improved by mutations in URE2 or PMA1.
    Genetics. 1998 Jun;149(2):865-78 PMID: 9611198
  13. SNAREs and the secretory pathway-lessons from yeast.
    Exp Cell Res. 1999 Feb 25;247(1):1-8 PMID: 10047442
  14. A novel RING finger protein complex essential for a late step in protein transport to the yeast vacuole.
    Mol Biol Cell. 1997 Nov;8(11):2307-27 PMID: 9362071
  15. Review: biosynthesis and function of yeast vacuolar proteases.
    Yeast. 1996 Jan;12(1):1-16 PMID: 8789256
  16. The product of HUM1, a novel yeast gene, is required for vacuolar Ca2+/H+ exchange and is related to mammalian Na+/Ca2+ exchangers.
    Mol Cell Biol. 1996 Jul;16(7):3730-41 PMID: 8668190
  17. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.
    Genetics. 1989 May;122(1):19-27 PMID: 2659436
  18. The membrane protein alkaline phosphatase is delivered to the vacuole by a route that is distinct from the VPS-dependent pathway.
    J Cell Biol. 1997 Aug 11;138(3):531-45 PMID: 9245784
  19. Interaction of coatomer with aminoglycoside antibiotics: evidence that coatomer has at least two dilysine binding sites.
    Mol Biol Cell. 1997 Oct;8(10):1901-10 PMID: 9348532
  20. The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene.
    Cell. 1994 May 20;77(4):579-86 PMID: 8187177
  21. Mutants of Saccharomyces cerevisiae that block intervacuole vesicular traffic and vacuole division and segregation.
    Proc Natl Acad Sci U S A. 1990 Feb;87(3):1076-80 PMID: 1689059
  22. Protein traffic in the yeast endocytic and vacuolar protein sorting pathways.
    Curr Opin Cell Biol. 1998 Aug;10(4):513-22 PMID: 9719873
  23. Novel Golgi to vacuole delivery pathway in yeast: identification of a sorting determinant and required transport component.
    EMBO J. 1997 May 15;16(10):2769-82 PMID: 9184222
  24. Yeast Vps45p is a Sec1p-like protein required for the consumption of vacuole-targeted, post-Golgi transport vesicles.
    Eur J Cell Biol. 1994 Dec;65(2):305-18 PMID: 7720726
  25. The yeast adaptor protein complex, AP-3, is essential for the efficient delivery of alkaline phosphatase by the alternate pathway to the vacuole.
    J Cell Biol. 1997 Dec 29;139(7):1761-74 PMID: 9412470
  26. Yeast glycosylation mutants are sensitive to aminoglycosides.
    Proc Natl Acad Sci U S A. 1995 Feb 28;92(5):1287-91 PMID: 7877969
  27. Mutations in the VPS45 gene, a SEC1 homologue, result in vacuolar protein sorting defects and accumulation of membrane vesicles.
    J Cell Sci. 1994 Dec;107 ( Pt 12):3449-59 PMID: 7706396
  28. The yeast proteome database (YPD) and Caenorhabditis elegans proteome database (WormPD): comprehensive resources for the organization and comparison of model organism protein information.
    Nucleic Acids Res. 2000 Jan 1;28(1):73-6 PMID: 10592185
  29. Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast.
    J Cell Biol. 1994 Apr;125(2):283-98 PMID: 8163546
  30. Tlg2p, a yeast syntaxin homolog that resides on the Golgi and endocytic structures.
    J Biol Chem. 1998 May 8;273(19):11719-27 PMID: 9565594
  31. Protein sorting in yeast: mutants defective in vacuole biogenesis mislocalize vacuolar proteins into the late secretory pathway.
    Cell. 1986 Dec 26;47(6):1041-51 PMID: 3536126
  32. A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast.
    J Cell Biol. 1995 Mar;128(5):779-92 PMID: 7533169
  33. A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains.
    Genetics. 1987 Aug;116(4):541-5 PMID: 3305158
  34. Protein phosphatase 2B of Saccharomyces cerevisiae is required for tolerance to manganese, in blocking the entry of ions into the cells.
    Eur J Biochem. 1995 Sep 15;232(3):712-7 PMID: 7588708
  35. Saccharomyces cerevisiae mutants lacking a functional vacuole are defective for aspects of the pheromone response.
    J Cell Sci. 1990 Nov;97 ( Pt 3):517-25 PMID: 2074270
  36. VPS21 encodes a rab5-like GTP binding protein that is required for the sorting of yeast vacuolar proteins.
    EMBO J. 1994 Mar 15;13(6):1297-309 PMID: 8137814
  37. The protein phosphatase calcineurin is essential for NaCl tolerance of Saccharomyces cerevisiae.
    J Biol Chem. 1994 Mar 25;269(12):8792-6 PMID: 8132612
  38. Visualization of receptor-mediated endocytosis in yeast.
    Mol Biol Cell. 1999 Mar;10(3):799-817 PMID: 10069819
  39. Novel syntaxin homologue, Pep12p, required for the sorting of lumenal hydrolases to the lysosome-like vacuole in yeast.
    Mol Biol Cell. 1996 Apr;7(4):579-94 PMID: 8730101
  40. Microtubules orient the mitotic spindle in yeast through dynein-dependent interactions with the cell cortex.
    J Cell Biol. 1997 Aug 11;138(3):629-41 PMID: 9245791
  41. Aut2p and Aut7p, two novel microtubule-associated proteins are essential for delivery of autophagic vesicles to the vacuole.
    EMBO J. 1998 Jul 1;17(13):3597-607 PMID: 9649430
  42. Genes for directing vacuolar morphogenesis in Saccharomyces cerevisiae. I. Isolation and characterization of two classes of vam mutants.
    J Biol Chem. 1992 Sep 15;267(26):18665-70 PMID: 1526998
  43. Calcineurin inhibits VCX1-dependent H+/Ca2+ exchange and induces Ca2+ ATPases in Saccharomyces cerevisiae.
    Mol Cell Biol. 1996 May;16(5):2226-37 PMID: 8628289
  44. Vps52p, Vps53p, and Vps54p form a novel multisubunit complex required for protein sorting at the yeast late Golgi.
    Mol Biol Cell. 2000 Jan;11(1):305-23 PMID: 10637310
  45. Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases.
    Mol Cell Biol. 1988 Nov;8(11):4936-48 PMID: 3062374
  46. Proteinase mutants of Saccharomyces cerevisiae.
    Genetics. 1977 Jan;85(1):23-33 PMID: 320092
  47. Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vps mutants.
    Mol Biol Cell. 1992 Dec;3(12):1389-402 PMID: 1493335
  48. Immunolocalization of Kex2 protease identifies a putative late Golgi compartment in the yeast Saccharomyces cerevisiae.
    J Cell Biol. 1991 May;113(3):527-38 PMID: 2016334
  49. Yeast has homologs (CNA1 and CNA2 gene products) of mammalian calcineurin, a calmodulin-regulated phosphoprotein phosphatase.
    Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7376-80 PMID: 1651503
  50. Calcineurin-dependent growth control in Saccharomyces cerevisiae mutants lacking PMC1, a homolog of plasma membrane Ca2+ ATPases.
    J Cell Biol. 1994 Feb;124(3):351-63 PMID: 7507493
  51. Analysis of Tub4p, a yeast gamma-tubulin-like protein: implications for microtubule-organizing center function.
    J Cell Biol. 1996 Jul;134(2):443-54 PMID: 8707828
  52. Inhibition of secretion by 1,3-Cyclohexanebis(methylamine), a dibasic compound that interferes with coatomer function.
    Mol Biol Cell. 1999 Apr;10(4):921-33 PMID: 10198047
  53. Molecular genetics of the yeast vacuolar H(+)-ATPase.
    J Exp Biol. 1992 Nov;172:67-81 PMID: 1491234
  54. Synthetic genetic interactions with temperature-sensitive clathrin in Saccharomyces cerevisiae. Roles for synaptojanin-like Inp53p and dynamin-related Vps1p in clathrin-dependent protein sorting at the trans-Golgi network.
    Genetics. 2000 Jan;154(1):83-97 PMID: 10628971
  55. Sec8p and Sec15p are components of a plasma membrane-associated 19.5S particle that may function downstream of Sec4p to control exocytosis.
    J Cell Biol. 1992 Sep;118(5):1041-56 PMID: 1512289
  56. Two syntaxin homologues in the TGN/endosomal system of yeast.
    EMBO J. 1998 Jan 2;17(1):113-26 PMID: 9427746
  57. Protein phosphatase type 2B (calcineurin)-mediated, FK506-sensitive regulation of intracellular ions in yeast is an important determinant for adaptation to high salt stress conditions.
    EMBO J. 1993 Nov;12(11):4063-71 PMID: 7693452
  58. Calcineurin is essential in cyclosporin A- and FK506-sensitive yeast strains.
    Proc Natl Acad Sci U S A. 1994 Jun 7;91(12):5372-6 PMID: 7515500
  59. Calcineurin, the Ca2+/calmodulin-dependent protein phosphatase, is essential in yeast mutants with cell integrity defects and in mutants that lack a functional vacuolar H(+)-ATPase.
    Mol Cell Biol. 1995 Aug;15(8):4103-14 PMID: 7542741
  60. Regulatory subunit (CNB1 gene product) of yeast Ca2+/calmodulin-dependent phosphoprotein phosphatases is required for adaptation to pheromone.
    Mol Cell Biol. 1992 Aug;12(8):3460-9 PMID: 1321337
  61. Calcineurin acts through the CRZ1/TCN1-encoded transcription factor to regulate gene expression in yeast.
    Genes Dev. 1997 Dec 15;11(24):3432-44 PMID: 9407035
  62. VPS27 controls vacuolar and endocytic traffic through a prevacuolar compartment in Saccharomyces cerevisiae.
    J Cell Biol. 1995 Nov;131(3):603-17 PMID: 7593183
  63. vph6 mutants of Saccharomyces cerevisiae require calcineurin for growth and are defective in vacuolar H(+)-ATPase assembly.
    Genetics. 1995 Nov;141(3):833-44 PMID: 8582630
  64. Specific retrieval of the exocytic SNARE Snc1p from early yeast endosomes.
    Mol Biol Cell. 2000 Jan;11(1):23-38 PMID: 10637288
  65. Modifications of the Golgi apparatus in Saccharomyces cerevisiae lacking microtubules.
    Anat Rec. 1996 Oct;246(2):162-8 PMID: 8888957
  66. Homotypic vacuolar fusion mediated by t- and v-SNAREs.
    Nature. 1997 May 8;387(6629):199-202 PMID: 9144293
  67. Sec15 protein, an essential component of the exocytotic apparatus, is associated with the plasma membrane and with a soluble 19.5S particle.
    J Cell Biol. 1991 Mar;112(6):1117-31 PMID: 1900300
  68. Membrane tethering in intracellular transport.
    Curr Opin Cell Biol. 1999 Aug;11(4):453-9 PMID: 10449330
  69. Cruising along microtubule highways: how membranes move through the secretory pathway.
    J Cell Biol. 1998 Mar 23;140(6):1277-80 PMID: 9508761
  70. Coatomer (COPI)-coated vesicles: role in intracellular transport and protein sorting.
    Curr Opin Cell Biol. 1997 Aug;9(4):484-7 PMID: 9261053
  71. Organelle assembly in yeast: characterization of yeast mutants defective in vacuolar biogenesis and protein sorting.
    J Cell Biol. 1988 Oct;107(4):1369-83 PMID: 3049619
  72. SGD: Saccharomyces Genome Database.
    Nucleic Acids Res. 1998 Jan 1;26(1):73-9 PMID: 9399804
  73. An essential role of the yeast pheromone-induced Ca2+ signal is to activate calcineurin.
    Mol Biol Cell. 1997 Feb;8(2):263-77 PMID: 9190206
  74. Dynamic retention of TGN membrane proteins in Saccharomyces cerevisiae.
    Trends Cell Biol. 1993 Dec;3(12):426-32 PMID: 14731888
  75. Regulation of tubulin polypeptides and microtubule function: Luv1p [correction of Rki1p] interacts with the beta-tubulin binding protein Rbl2p.
    Chromosoma. 1998 Dec;107(6-7):471-8 PMID: 9914379
  76. The yeast v-SNARE Vti1p mediates two vesicle transport pathways through interactions with the t-SNAREs Sed5p and Pep12p.
    J Cell Biol. 1997 Jun 30;137(7):1511-24 PMID: 9199167
  77. Nonclassical protein sorting to the yeast vacuole.
    J Biol Chem. 1998 May 1;273(18):10807-10 PMID: 9556549
  78. Cooperation of calcineurin and vacuolar H(+)-ATPase in intracellular Ca2+ homeostasis of yeast cells.
    J Biol Chem. 1995 Apr 28;270(17):10113-9 PMID: 7537264
  79. The Exocyst is a multiprotein complex required for exocytosis in Saccharomyces cerevisiae.
    EMBO J. 1996 Dec 2;15(23):6483-94 PMID: 8978675
  80. Multiple sorting pathways between the late Golgi and the vacuole in yeast.
    Biochim Biophys Acta. 1998 Aug 14;1404(1-2):211-30 PMID: 9714809
  81. Predicting coiled coils from protein sequences.
    Science. 1991 May 24;252(5009):1162-4 PMID: 2031185
  82. A sorting nexin-1 homologue, Vps5p, forms a complex with Vps17p and is required for recycling the vacuolar protein-sorting receptor.
    Mol Biol Cell. 1997 Aug;8(8):1529-41 PMID: 9285823
  83. Isolation of yeast mutants defective in protein targeting to the vacuole.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):9075-9 PMID: 3538017
Article Info
Journal
Molecular biology of the cell
Abbr.
Mol Biol Cell
ISSN
1059-1524
Published
2000-07-00
Pages
2429-43
Language
English
Region
United States
NLM ID
9201390
PMCID
PMC14930
Subset
IM
Grants
NIGMS NIH HHS · R01 GM048729 · United States
NIGMS NIH HHS · T32 GM007276 · United States
NIGMS NIH HHS · 5 T32 GM07276 · United States
NIGMS NIH HHS · GM-48729 · United States
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