A comparison of signal sequence prediction methods using a test set of signal peptides.

Bioinformatics (Oxford, England) ·Vol. 16 ·No. 8 ·2000-08-00 ·Pages 741-2

Menne KM, Hermjakob H, Apweiler R

Abstract

We describe the creation of a test set containing secretory and non-secretory proteins. Five existing prediction programs for signal sequences and their cleavage sites are compared on the basis of this test set: SPScan, SigCleave, SignalP V1.1, SignalP V2.0. b2-HMM and SignalP V2.0.b2-NN.

MeSH Terms

Protein Sorting Signals Software

Chemicals

Protein Sorting Signals

Authors & Affiliations

3 authors, click to expand affiliations / ORCID

Menne K M

EMBL Outstation Hinxton - The European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.

Hermjakob H

Apweiler R

Article Info

Journal

Bioinformatics (Oxford, England)

Abbr.

Bioinformatics

ISSN

1367-4803

DOI

10.1093/bioinformatics/16.8.741

Published

2000-08-00

Pages

741-2

Language

English

Region

England

NLM ID

9808944

Subset

External Links

PubMed source DOI: 10.1093/bioinformatics/16.8.741 View journal details

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A comparison of signal sequence prediction methods using a test set of signal peptides.

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