VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL.

Bioinformatics (Oxford, England) ·Vol. 16 ·No. 11 ·2000-11-00 ·Pages 1048-9

Kersey P, Hermjakob H, Apweiler R

Abstract

The program varsplic.pl uses information present in the SWISS-PROT and TrEMBL databases to create new records for alternatively spliced isoforms. These new records can be used in similarity searches. The program is available at ftp://ftp.ebi.ac.uk/pub/software/swissprot/, together with regularly updated output files. [email protected]

MeSH Terms

Alternative Splicing Animals Computational Biology Databases, Factual Humans Internet Protein Isoforms/genetics Proteins/genetics Software

Chemicals

Protein Isoforms Proteins

Authors & Affiliations

3 authors, click to expand affiliations / ORCID

Kersey P

EMBL Outstation Hinxton, The European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK. [email protected]

Hermjakob H

Apweiler R

Article Info

Journal

Bioinformatics (Oxford, England)

Abbr.

Bioinformatics

ISSN

1367-4803

DOI

10.1093/bioinformatics/16.11.1048

[email protected]

Published

2000-11-00

Pages

1048-9

Language

English

Region

England

NLM ID

9808944

Subset

External Links

PubMed source DOI: 10.1093/bioinformatics/16.11.1048 View journal details

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VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL.

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