Home LiteratureArticle Details
PMID: 11248682 Published · ppublish English Journal Article

Contributions of the substrate-binding arginine residues to maleate-induced closure of the active site of Escherichia coli aspartate aminotransferase.

European journal of biochemistry ·Vol. 268 ·No. 6 ·2001-03-00 ·Pages 1640-5

Matharu A, Hayashi H, Kagamiyama H, Maras B, John RA

Abstract

Crystallography shows that aspartate aminotransferase binds dicarboxylate substrate analogues by bonds to Arg292 and Arg386, respectively [Jager, J, Moser, M. Sauder, U. & Jansonius, J. N. (1994) J. Mol. Biol., 239, 285-305]. The contribution of each interaction to the conformational change that the enzyme undergoes when it binds ligands via these residues, is assessed by probing mutant forms of the enzyme lacking either or both arginines. The probes used are NaH(3)BCN which reduces the cofactor imine, the reactive substrate analogue, cysteine sulfinate and proteolysis by trypsin. The unreactive substrate analogue, maleate, is used to induce closure. Each single mutant reacted only 2.5-fold more slowly with NaH(3)BCN than the wild-type indicating that charge repulsion by the arginines contributes little to maintaining the open conformation. Maleate lowered the rate of reduction of the wild-type enzyme more than 300-fold but had little effect on the reaction of the mutant enzymes indicating that the ability of this dicarboxylate analogue to bridge the arginines precisely makes the major contribution to closure. The R292L mutant reacted 20 times more rapidly with cysteine sulfinate than R386L but 5 x 10(4) times more slowly than the wild-type enzyme, consistent with the proposal that enzyme's catalytic abilities are not developed unless closure is induced by bridging of the arginines. Proteolysis of the mutants with trypsin showed that, in the wild-type enzyme, the bonds most susceptible to trypsin are those contributed by Arg292 and Arg386. Proteolysis of the next most susceptible bond, at Arg25 in the double mutant, was protected by maleate demonstrating the presence of an additional site on the enzyme for binding dicarboxylates.

MeSH Terms
Amino Acid Sequence Aspartate Aminotransferases/chemistry,metabolism Binding Sites Borohydrides/chemistry Cysteine/analogs & derivatives,chemistry Escherichia coli/enzymology Hydrogen-Ion Concentration Kinetics Maleates/metabolism Neurotransmitter Agents Spectrometry, Mass, Electrospray Ionization Spectrophotometry, Ultraviolet Substrate Specificity Trypsin/metabolism
Chemicals
Borohydrides Maleates Neurotransmitter Agents maleic acid sodium cyanoborohydride Aspartate Aminotransferases Trypsin Cysteine cysteine sulfinic acid
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Matharu A
School of Biosciences, University of Wales, Cardiff, UK.
Hayashi H
Kagamiyama H
Maras B
John R A
Article Info
Journal
European journal of biochemistry
Abbr.
Eur J Biochem
ISSN
0014-2956
Published
2001-03-00
Pages
1640-5
Language
English
Region
England
NLM ID
0107600
Subset
IM
External Links
PubMed source
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]