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PMID: 11438714 Published · ppublish English Journal Article

Intrinsic noise in gene regulatory networks.

Thattai M, van Oudenaarden A

Abstract

Cells are intrinsically noisy biochemical reactors: low reactant numbers can lead to significant statistical fluctuations in molecule numbers and reaction rates. Here we use an analytic model to investigate the emergent noise properties of genetic systems. We find for a single gene that noise is essentially determined at the translational level, and that the mean and variance of protein concentration can be independently controlled. The noise strength immediately following single gene induction is almost twice the final steady-state value. We find that fluctuations in the concentrations of a regulatory protein can propagate through a genetic cascade; translational noise control could explain the inefficient translation rates observed for genes encoding such regulatory proteins. For an autoregulatory protein, we demonstrate that negative feedback efficiently decreases system noise. The model can be used to predict the noise characteristics of networks of arbitrary connectivity. The general procedure is further illustrated for an autocatalytic protein and a bistable genetic switch. The analysis of intrinsic noise reveals biological roles of gene network structures and can lead to a deeper understanding of their evolutionary origin.

MeSH Terms
Gene Expression Regulation Homeostasis Mathematical Computing Models, Genetic Prokaryotic Cells Transcriptional Activation
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Thattai M
Department of Physics, Room 13-2010, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.
van Oudenaarden A
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2001-07-17
Epub
2001-00-03
Pages
8614-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC37484
Subset
IM
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