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PMID: 11773970 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

CAN--a pan-carnivore SINE family.

Vassetzky NS, Kramerov DA

Abstract

Short retroposons or short interspersed elements (SINEs) constituting 5-10% genome have been isolated from various organisms. CAN SINEs initially found in American mink were named after dogs (Canis), and the range of their distribution in the genomes of carnivores and mammals in general remained topical. Here we demonstrate CAN sequences in representatives of all carnivore families, but not beyond carnivores, on the basis of sequence bank search and genomic PCR. Analysis of their distribution supports division of carnivores into caniform (dogs, mustelids, raccoons, bears, and pinnipeds) and feliform (cats, civets, and hyenas) lineages. CAN structure is considered in the context of their function and evolution.

MeSH Terms
Animals Base Sequence Carnivora/genetics Cats Chromosome Mapping Dogs Evolution, Molecular Humans Mice Molecular Sequence Data Pedigree Phylogeny Retroelements/genetics Seals, Earless Sequence Alignment Short Interspersed Nucleotide Elements/genetics Ursidae Walruses
Chemicals
Retroelements
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Vassetzky Nikita S
Laboratory of Eukaryotic Genomes Evolution, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, 32 Vavilov St., Moscow, 119991 Russia. [email protected]
Kramerov Dmitri A
Article Info
Journal
Mammalian genome : official journal of the International Mammalian Genome Society
Abbr.
Mamm Genome
ISSN
0938-8990
Published
2002-01-00
Pages
50-7
Language
English
Region
United States
NLM ID
9100916
Subset
IM
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