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PMID: 11827487 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Analysis of the E. coli NifS CsdB protein at 2.0 A reveals the structural basis for perselenide and persulfide intermediate formation.

Journal of molecular biology ·Vol. 315 ·No. 5 ·2002-02-01 ·Pages 1199-208

Lima CD

Abstract

The Escherichia coli NifS CsdB protein is a member of the homodimeric pyridoxal 5'-phosphate (PLP)-dependent family of enzymes. These enzymes are capable of decomposing cysteine or selenocysteine into L-alanine and sulfur or selenium, respectively. E. coli NifS CsdB has a high specificity for L-selenocysteine in comparison to l-cysteine, suggesting a role for this enzyme is selenium metabolism. The 2.0 A crystal structure of E. coli NifS CsdB reveals a high-resolution view of the active site of this enzyme in apo-, persulfide, perselenide, and selenocysteine-bound intermediates, suggesting a mechanism for the stabilization of the enzyme persulfide and perselenide intermediates during catalysis, a necessary intermediate in the formation of sulfur and selenium containing metabolites.

MeSH Terms
Apoenzymes/chemistry,genetics,metabolism Bacillus subtilis/enzymology,genetics Bacterial Proteins/chemistry,genetics,metabolism Binding Sites Crystallography, X-Ray Cysteine/analogs & derivatives,metabolism Disulfides/metabolism Escherichia coli/enzymology,genetics Ligands Lyases/chemistry,genetics,metabolism Models, Molecular Organoselenium Compounds/metabolism Protein Conformation Selenocysteine/metabolism Structure-Activity Relationship Sulfides/metabolism Thermodynamics
Chemicals
Apoenzymes Bacterial Proteins Disulfides Ligands Organoselenium Compounds Sulfides nifS protein, Bacteria persulfides Selenocysteine cysteine persulfide Lyases selenocysteine lyase Cysteine
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Lima Christopher D
Biochemistry Department and Structural Biology Program, Weill Medical College of Cornell University, New York, NY 10021, USA. [email protected]
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
2002-02-01
Pages
1199-208
Language
English
Region
England
NLM ID
2985088R
Subset
IM
Databases
PDB
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