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PMID: 12089031 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Growth in coculture stimulates metabolism of the phenylurea herbicide isoproturon by Sphingomonas sp. strain SRS2.

Applied and environmental microbiology ·Vol. 68 ·No. 7 ·2002-07-00 ·Pages 3478-85

Sørensen SR, Ronen Z, Aamand J

Abstract

Metabolism of the phenylurea herbicide isoproturon by Sphingomonas sp. strain SRS2 was significantly enhanced when the strain was grown in coculture with a soil bacterium (designated strain SRS1). Both members of this consortium were isolated from a highly enriched isoproturon-degrading culture derived from an agricultural soil previously treated regularly with the herbicide. Based on analysis of the 16S rRNA gene, strain SRS1 was assigned to the beta-subdivision of the proteobacteria and probably represents a new genus. Strain SRS1 was unable to degrade either isoproturon or its known metabolites 3-(4-isopropylphenyl)-1-methylurea, 3-(4-isopropylphenyl)-urea, or 4-isopropyl-aniline. Pure culture studies indicate that Sphingomonas sp. SRS2 is auxotrophic and requires components supplied by association with other soil bacteria. A specific mixture of amino acids appeared to meet these requirements, and it was shown that methionine was essential for Sphingomonas sp. SRS2. This suggests that strain SRS1 supplies amino acids to Sphingomonas sp. SRS2, thereby leading to rapid metabolism of (14)C-labeled isoproturon to (14)CO(2) and corresponding growth of strain SRS2. Proliferation of strain SRS1 suggests that isoproturon metabolism by Sphingomonas sp. SRS2 provides unknown metabolites or cell debris that supports growth of strain SRS1. The role of strain SRS1 in the consortium was not ubiquitous among soil bacteria; however, the indigenous soil microflora and some strains from culture collections also stimulate isoproturon metabolism by Sphingomonas sp. strain SRS2 to a similar extent.

MeSH Terms
Herbicides/metabolism Methylurea Compounds/metabolism Molecular Sequence Data Phenylurea Compounds/metabolism Soil Microbiology Sphingomonas/metabolism
Chemicals
Herbicides Methylurea Compounds Phenylurea Compounds isoproturon
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Sørensen Sebastian R
Department of Geochemistry, Geological Survey of Denmark and Greenland (GEUS), Øster Voldgade 10, DK-1350 Copenhagen K, Denmark. [email protected]
Ronen Zeev
Aamand Jens
References (28)
28 references, click to expand
  1. Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.
    Appl Environ Microbiol. 1995 Apr;61(4):1451-7 PMID: 16534995
  2. Degradation of herbicides in two sandy aquifers under different redox conditions.
    Chemosphere. 2001 Jul;44(2):231-6 PMID: 11444305
  3. Biodegradation of the phenylurea herbicide isoproturon and its metabolites in agricultural soils.
    Biodegradation. 2001;12(1):69-77 PMID: 11693297
  4. Towards elucidation of microbial community metabolic pathways: unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry.
    Environ Microbiol. 1999 Apr;1(2):167-74 PMID: 11207732
  5. Occurrence of pesticides in Danish shallow ground water.
    Chemosphere. 1998 Sep;37(7):1307-16 PMID: 9734322
  6. Analysing transformation products of herbicide residues in environmental samples.
    Water Res. 2001 Apr;35(6):1371-8 PMID: 11317883
  7. Growth of a bacterial consortium on triclosan.
    FEMS Microbiol Ecol. 2001 Jul;36(2-3):105-112 PMID: 11451514
  8. Polaromonas vacuolata gen. nov., sp. nov., a psychrophilic, marine, gas vacuolate bacterium from Antarctica.
    Int J Syst Bacteriol. 1996 Jul;46(3):822-6 PMID: 8782696
  9. Enzyme evolution in a microbial community growing on the herbicide Dalapon.
    Nature. 1976 Oct 7;263(5577):476-9 PMID: 972691
  10. Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils.
    Appl Environ Microbiol. 2000 Jul;66(7):2773-82 PMID: 10877767
  11. Rapid mineralization of benzo[a]pyrene by a microbial consortium growing on diesel fuel.
    Appl Environ Microbiol. 2000 Oct;66(10):4205-11 PMID: 11010861
  12. Isolation of isoproturon-degrading bacteria from treated soil via three different routes.
    J Appl Microbiol. 1998 Aug;85(2):309-16 PMID: 9750305
  13. Degradation of the herbicide mecoprop [2-(2-methyl-4-chlorophenoxy)propionic Acid] by a synergistic microbial community.
    Appl Environ Microbiol. 1985 Feb;49(2):429-33 PMID: 16346731
  14. Penetration of herbicides to groundwater in an unconfined chalk aquifer following normal soil applications.
    J Contam Hydrol. 2001 Dec 1;53(1-2):101-17 PMID: 11816989
  15. Determination of phenylurea herbicides in natural waters at concentrations below 1 ng l(-1) using solid-phase extraction, derivatization, and solid-phase microextraction-gas chromatography-mass spectrometry.
    J Chromatogr A. 2001 Sep 28;930(1-2):9-19 PMID: 11681583
  16. Degradation of chloronitrobenzenes by a coculture of Pseudomonas putida and a Rhodococcus sp.
    Appl Environ Microbiol. 1999 Mar;65(3):1083-91 PMID: 10049867
  17. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  18. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene.
    Science. 1997 Jun 6;276(5318):1568-71 PMID: 9171062
  19. A new medium for the enumeration and subculture of bacteria from potable water.
    Appl Environ Microbiol. 1985 Jan;49(1):1-7 PMID: 3883894
  20. Phylogenetic Analysis of Microbial Diversity in the Rhizoplane of Oilseed Rape (Brassica napus cv. Westar) Employing Cultivation-Dependent and Cultivation-Independent Approaches.
    Microb Ecol. 2001 Aug;42(2):136-149 PMID: 12024277
  21. Mineralization of 4-Chlorodibenzofuran by a Consortium Consisting of Sphingomonas sp. Strain RW1 and Burkholderia sp. Strain JWS.
    Appl Environ Microbiol. 1997 Sep;63(9):3458-62 PMID: 16535686
  22. The genus Sphingomonas: physiology and ecology.
    Curr Opin Biotechnol. 1996 Jun;7(3):301-6 PMID: 8785434
  23. Isolation from agricultural soil and characterization of a Sphingomonas sp. able to mineralize the phenylurea herbicide isoproturon.
    Appl Environ Microbiol. 2001 Dec;67(12):5403-9 PMID: 11722885
  24. Mineralization of 2,4-D, mecoprop, isoproturon and terbuthylazine in a chalk aquifer.
    Pest Manag Sci. 2001 Jun;57(6):531-6 PMID: 11407030
  25. Enrichment and molecular characterization of a bacterial culture that degrades methoxy-methyl urea herbicides and their aniline derivatives.
    Appl Environ Microbiol. 2000 Dec;66(12):5110-5 PMID: 11097876
  26. Spatial variability in the degradation rate of isoproturon in soil.
    Environ Pollut. 2001;111(3):407-15 PMID: 11202745
  27. Spatial changes in the bacterial community structure along a vertical oxygen gradient in flooded paddy soil cores.
    Appl Environ Microbiol. 2000 Feb;66(2):754-62 PMID: 10653747
  28. Molecular basis of a bacterial consortium: interspecies catabolism of atrazine.
    Appl Environ Microbiol. 1998 Jan;64(1):178-84 PMID: 16349478
Article Info
Journal
Applied and environmental microbiology
Abbr.
Appl Environ Microbiol
ISSN
0099-2240
Published
2002-07-00
Pages
3478-85
Language
English
Region
United States
NLM ID
7605801
PMCID
PMC126762
Subset
IM
Databases
GENBANK
AJ215639
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