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PMID: 12454640 Published · ppublish English Journal Article Review

Microarray databases: standards and ontologies.

Nature genetics ·Vol. 32 Suppl ·2002-12-00 ·Pages 469-73

Stoeckert CJ, Causton HC, Ball CA

Abstract

A single microarray can provide information on the expression of tens of thousands of genes. The amount of information generated by a microarray-based experiment is sufficiently large that no single study can be expected to mine each nugget of scientific information. As a consequence, the scale and complexity of microarray experiments require that computer software programs do much of the data processing, storage, visualization, analysis and transfer. The adoption of common standards and ontologies for the management and sharing of microarray data is essential and will provide immediate benefit to the research community.

MeSH Terms
Database Management Systems Databases, Genetic/standards Electronic Data Processing Gene Expression Profiling/methods,standards Humans Information Storage and Retrieval Internet Models, Biological Oligonucleotide Array Sequence Analysis/methods,standards Programming Languages Quality Control Sequence Analysis, DNA Software
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Stoeckert Christian J
Center for Bioinformatics and Department of Genetics, University of Pennsylvania, 423 Guardian Drive, Philadelphia, Pennsylvania 19104-6021, USA. [email protected]
Causton Helen C
Ball Catherine A
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1061-4036
Published
2002-12-00
Pages
469-73
Language
English
Region
United States
NLM ID
9216904
Subset
IM
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