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PMID: 12718881 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Structural and mechanistic basis of pre- and posttransfer editing by leucyl-tRNA synthetase.

Molecular cell ·Vol. 11 ·No. 4 ·2003-04-00 ·Pages 951-63

Lincecum TL, Tukalo M, Yaremchuk A, Mursinna RS, Williams AM, Sproat BS, Van Den Eynde W, Link A, Van Calenbergh S, Grøtli M, Martinis SA, Cusack S

Abstract

The aminoacyl-tRNA synthetases link tRNAs with their cognate amino acid. In some cases, their fidelity relies on hydrolytic editing that destroys incorrectly activated amino acids or mischarged tRNAs. We present structures of leucyl-tRNA synthetase complexed with analogs of the distinct pre- and posttransfer editing substrates. The editing active site binds the two different substrates using a single amino acid discriminatory pocket while preserving the same mode of adenine recognition. This suggests a similar mechanism of hydrolysis for both editing substrates that depends on a key, completely conserved aspartic acid, which interacts with the alpha-amino group of the noncognate amino acid and positions both substrates for hydrolysis. Our results demonstrate the economy by which a single active site accommodates two distinct substrates in a proofreading process critical to the fidelity of protein synthesis.

MeSH Terms
Adenosine/analogs & derivatives,metabolism Amino Acids/genetics,metabolism Aspartic Acid/genetics,metabolism Binding Sites/genetics Leucine-tRNA Ligase/genetics,metabolism Macromolecular Substances Molecular Conformation Protein Biosynthesis/genetics Proteins/genetics RNA Editing/genetics RNA, Transfer/genetics,metabolism
Chemicals
Amino Acids Macromolecular Substances Proteins Aspartic Acid RNA, Transfer Leucine-tRNA Ligase Adenosine
Authors & Affiliations
12 authors, click to expand affiliations / ORCID
Lincecum Tommie L
Department of Biology and Biochemistry, University of Houston, Texas 77204, USA.
Tukalo Michael
Yaremchuk Anna
Mursinna Richard S
Williams Amy M
Sproat Brian S
Van Den Eynde Wendy
Link Andreas
Van Calenbergh Serge
Grøtli Morten
Martinis Susan A
Cusack Stephen
Article Info
Journal
Molecular cell
Abbr.
Mol Cell
ISSN
1097-2765
Published
2003-04-00
Pages
951-63
Language
English
Region
United States
NLM ID
9802571
Subset
IM
Grants
NIGMS NIH HHS · GM63789 · United States
Databases
PDB
Analysis Services
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