JenPep: a novel computational information resource for immunobiology and vaccinology.

Journal of chemical information and computer sciences ·Vol. 43 ·No. 4 ·2003-00-00 ·Pages 1276-87

McSparron H, Blythe MJ, Zygouri C, Doytchinova IA, Flower DR

Abstract

JenPep is a relational database containing a compendium of thermodynamic binding data for the interaction of peptides with a range of important immunological molecules: the major histocompatibility complex, TAP transporter, and T cell receptor. The database also includes annotated lists of B cell and T cell epitopes. Version 2.0 of the database is implemented in a bespoke postgreSQL database system and is fully searchable online via a perl/HTML interface (URL: http://www.jenner.ac.uk/JenPep).

MeSH Terms

ATP-Binding Cassette Transporters/immunology,metabolism Antigen Presentation/immunology Databases, Protein Epitopes, T-Lymphocyte/immunology,metabolism Humans Major Histocompatibility Complex/immunology Peptides/chemistry,immunology,metabolism Protein Binding Receptors, Antigen, T-Cell/immunology,metabolism Thermodynamics User-Computer Interface Vaccines

Chemicals

ATP-Binding Cassette Transporters Epitopes, T-Lymphocyte Peptides Receptors, Antigen, T-Cell Vaccines

Authors & Affiliations

5 authors, click to expand affiliations / ORCID

McSparron Helen

Edward Jenner Institute for Vaccine Research, Compton, Berkshire, UK RG20 7NN.

Blythe Martin J

Zygouri Christianna

Doytchinova Irini A

Flower Darren R

Article Info

Journal

Journal of chemical information and computer sciences

Abbr.

J Chem Inf Comput Sci

ISSN

0095-2338

DOI

10.1021/ci030461e

Published

2003-00-00

Pages

1276-87

Language

English

Region

United States

NLM ID

7505012

Subset

External Links

PubMed source DOI: 10.1021/ci030461e

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JenPep: a novel computational information resource for immunobiology and vaccinology.

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