Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.
We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.
19 references, click to expand
-
Interval-specific congenic strains (ISCS): an experimental design for mapping a QTL into a 1-centimorgan interval.Mamm Genome. 1997 Mar;8(3):163-7 PMID: 9069114
-
Congenic mice: cutting tools for complex immune disorders.Nat Rev Immunol. 2003 Mar;3(3):243-52 PMID: 12658272
-
The map problem: a comparison of genetic and sequence-based physical maps.Am J Hum Genet. 2002 Jan;70(1):101-7 PMID: 11706388
-
Cluster analysis and display of genome-wide expression patterns.Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14863-8 PMID: 9843981
-
MINT: a Molecular INTeraction database.FEBS Lett. 2002 Feb 20;513(1):135-40 PMID: 11911893
-
Comparison of human genetic and sequence-based physical maps.Nature. 2001 Feb 15;409(6822):951-3 PMID: 11237020
-
Ensembl 2002: accommodating comparative genomics.Nucleic Acids Res. 2003 Jan 1;31(1):38-42 PMID: 12519943
-
Combining mouse congenic strains and microarray gene expression analyses to study a complex trait: the NOD model of type 1 diabetes.Genome Res. 2002 Feb;12(2):232-43 PMID: 11827943
-
Gene-expression profile of collagen-induced arthritis.J Autoimmun. 2002 Mar;18(2):159-67 PMID: 11908948
-
DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions.Nucleic Acids Res. 2002 Jan 1;30(1):303-5 PMID: 11752321
-
Mapping and analysis of quantitative trait loci in experimental populations.Nat Rev Genet. 2002 Jan;3(1):43-52 PMID: 11823790
-
Gene expression profiling of the nervous system in murine experimental autoimmune encephalomyelitis.Brain. 2001 Oct;124(Pt 10):1927-38 PMID: 11571211
-
Proteomics: drug target discovery on an industrial scale.Trends Biotechnol. 2002 Dec;20(12 Suppl):S45-51 PMID: 12570160
-
Spotting the target: microarrays for disease gene discovery.Curr Opin Genet Dev. 2001 Jun;11(3):258-63 PMID: 11377960
-
Shotgun proteomics and biomarker discovery.Dis Markers. 2002;18(2):99-105 PMID: 12364816
-
Evidence for an interferon-inducible gene, Ifi202, in the susceptibility to systemic lupus.Immunity. 2001 Sep;15(3):435-43 PMID: 11567633
-
The Association of Size Differences with Seed-Coat Pattern and Pigmentation in PHASEOLUS VULGARIS.Genetics. 1923 Nov;8(6):552-60 PMID: 17246026
-
BIND--a data specification for storing and describing biomolecular interactions, molecular complexes and pathways.Bioinformatics. 2000 May;16(5):465-77 PMID: 10871269
-
Review of proteomics with applications to genetic epidemiology.Genet Epidemiol. 2003 Feb;24(2):83-98 PMID: 12548670
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