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PMID: 14728280 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Proposed classification of cells in the Foundational Model of Anatomy.

AMIA ... Annual Symposium proceedings. AMIA Symposium ·2003-00-00 ·Pages 775

Agoncillo AV, Mejino JL, Rickard KL, Detwiler LT, Rosse C, Structural Informatics Group

Abstract

A logical and principled representation of cell types and their component parts could serve as a framework for correlating the various ontologies that are emerging in bioinformatics with a focus on cells and subcellular biological entities. In order to address this need we have extended the Foundational Model of Anatomy (FMA)1,2 from macroscopic to cellular and subcellular anatomical entities. The poster will provide a live demonstration of this implementation.

MeSH Terms
Anatomy/classification Cells/classification,cytology Computational Biology Humans Internet Software Vocabulary, Controlled
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Agoncillo Augusto V
Departments of Biological Structure, and Medical Education and Biomedical Informatics, University of Washington, Seattle, WA 98195, USA.
Mejino José L
Rickard Kurt L
Detwiler Landon T
Rosse Cornelius
Structural Informatics Group
References (3)
3 references, click to expand
  1. Efficient web-based navigation of the Foundational Model of Anatomy.
    AMIA Annu Symp Proc. 2003;:829 PMID: 14728334
  2. The digital anatomist foundational model: principles for defining and structuring its concept domain.
    Proc AMIA Symp. 1998;:820-4 PMID: 9929333
  3. Motivation and organizational principles for anatomical knowledge representation: the digital anatomist symbolic knowledge base.
    J Am Med Inform Assoc. 1998 Jan-Feb;5(1):17-40 PMID: 9452983
Article Info
Journal
AMIA ... Annual Symposium proceedings. AMIA Symposium
Abbr.
AMIA Annu Symp Proc
ISSN
1942-597X
Published
2003-00-00
Pages
775
Language
English
Region
United States
NLM ID
101209213
PMCID
PMC1479903
Subset
IM
Grants
NLM NIH HHS · LM03528 · United States
NLM NIH HHS · LM06822 · United States
External Links
PubMed source PMC Full Text
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