Abstract
The existence of a pathway for salvaging the coenzyme B(12) precursor dicyanocobinamide (Cbi) from the environment was established by genetic and biochemical means. The pathway requires the function of a previously unidentified amidohydrolase enzyme that converts adenosylcobinamide to adenosylcobyric acid, a bona fide intermediate of the de novo coenzyme B(12) biosynthetic route. The cbiZ gene of the methanogenic archaeon Methanosarcina mazei strain Göl was cloned, was overproduced in Escherichia coli, and the recombinant protein was isolated to homogeneity. HPLC, UV-visible spectroscopy, MS, and bioassay data established adenosylcobyric as the corrinoid product of the CbiZ-catalyzed reaction. Inactivation of the cbiZ gene in the extremely halophilic archaeon Halobacterium sp. strain NRC-1 blocked the ability of this archaeon to salvage Cbi. cbiZ function restored Cbi salvaging in a strain of the bacterium Salmonella enterica, whose Cbi-salvaging pathway was blocked. The salvaging of Cbi through the CbiZ enzyme appears to be an archaeal strategy because all of the genomes of B(12)-producing archaea have a cbiZ ortholog. Reasons for the evolution of two distinct pathways for Cbi salvaging in prokaryotes are discussed.
MeSH Terms
Aminohydrolases/genetics,metabolism
Cobamides/metabolism
Genes, Archaeal
Genetic Complementation Test
Halobacterium/genetics,metabolism
Methanosarcina/genetics,metabolism
Molecular Sequence Data
Mutation
Recombinant Proteins/genetics,metabolism
Salmonella enterica/genetics,metabolism
Species Specificity
Vitamin B 12/analogs & derivatives,metabolism
Chemicals
Cobamides
Recombinant Proteins
cobinamide
cobyric acid
Aminohydrolases
Vitamin B 12
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Woodson Jesse D
Department of Bacteriology, University of Wisconsin, Madison, WI 53726-4087, USA.
Escalante-Semerena Jorge C
References (27)
27 references, click to expand
-
An in vitro reducing system for the enzymic conversion of cobalamin to adenosylcobalamin.
J Biol Chem. 2001 Aug 24;276(34):32101-8
PMID: 11408479
-
Three-dimensional structure of ATP:corrinoid adenosyltransferase from Salmonella typhimurium in its free state, complexed with MgATP, or complexed with hydroxycobalamin and MgATP.
Biochemistry. 2001 Jan 16;40(2):361-74
PMID: 11148030
-
The biosynthesis of adenosylcobalamin (vitamin B12).
Nat Prod Rep. 2002 Aug;19(4):390-412
PMID: 12195810
-
Biosynthesis of cobalamin (vitamin B(12)).
Biochem Soc Trans. 2002 Aug;30(4):613-20
PMID: 12196148
-
The ATP:Co(I)rrinoid adenosyltransferase (CobA) enzyme of Salmonella enterica requires the 2'-OH group of ATP for function and yields inorganic triphosphate as its reaction byproduct.
J Biol Chem. 2002 Sep 6;277(36):33127-31
PMID: 12080060
-
The cobY gene of the archaeon Halobacterium sp. strain NRC-1 is required for de novo cobamide synthesis.
J Bacteriol. 2003 Jan;185(1):311-6
PMID: 12486068
-
A new pathway for salvaging the coenzyme B12 precursor cobinamide in archaea requires cobinamide-phosphate synthase (CbiB) enzyme activity.
J Bacteriol. 2003 Dec;185(24):7193-201
PMID: 14645280
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
Nature. 1970 Aug 15;227(5259):680-5
PMID: 5432063
-
Transformation in restriction-deficient Salmonella typhimurium LT2.
J Gen Microbiol. 1989 Sep;135(9):2561-7
PMID: 2697751
-
Identification and quantitation of corrinoid precursors of cobalamin from Pseudomonas denitrificans by high-performance liquid chromatography.
Anal Biochem. 1990 Aug 15;189(1):24-9
PMID: 2278386
-
A bifunctional protein from Pseudomonas denitrificans carries cobinamide kinase and cobinamide phosphate guanylyltransferase activities.
J Bacteriol. 1991 Oct;173(19):6052-7
PMID: 1655696
-
A Salmonella typhimurium cobalamin-deficient mutant blocked in 1-amino-2-propanol synthesis.
J Bacteriol. 1992 Apr;174(7):2138-44
PMID: 1551838
-
The poc locus is required for 1,2-propanediol-dependent transcription of the cobalamin biosynthetic (cob) and propanediol utilization (pdu) genes of Salmonella typhimurium.
J Bacteriol. 1992 Apr;174(7):2267-72
PMID: 1313000
-
Purification and characterization of the bifunctional CobU enzyme of Salmonella typhimurium LT2. Evidence for a CobU-GMP intermediate.
J Biol Chem. 1995 Oct 6;270(40):23560-9
PMID: 7559521
-
Cobalamin (coenzyme B12): synthesis and biological significance.
Annu Rev Microbiol. 1996;50:137-81
PMID: 8905078
-
Biochemistry and molecular genetics of cobalamin biosynthesis.
Prog Nucleic Acid Res Mol Biol. 1997;56:347-84
PMID: 9187059
-
How corrinoids are synthesized without oxygen: nature's first pathway to vitamin B12.
Chem Biol. 1997 Sep;4(9):659-66
PMID: 9331403
-
The complete genome sequence of the gram-positive bacterium Bacillus subtilis.
Nature. 1997 Nov 20;390(6657):249-56
PMID: 9384377
-
CobD, a novel enzyme with L-threonine-O-3-phosphate decarboxylase activity, is responsible for the synthesis of (R)-1-amino-2-propanol O-2-phosphate, a proposed new intermediate in cobalamin biosynthesis in Salmonella typhimurium LT2.
J Biol Chem. 1998 Jan 30;273(5):2684-91
PMID: 9446573
-
Three-dimensional structure of adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase from Salmonella typhimurium determined to 2.3 A resolution,.
Biochemistry. 1998 May 26;37(21):7686-95
PMID: 9601028
-
Cobalamin (vitamin B12) biosynthesis: identification and characterization of a Bacillus megaterium cobI operon.
Biochem J. 1998 Oct 1;335 ( Pt 1):159-66
PMID: 9742225
-
Three-dimensional structure of adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase (CobU) complexed with GMP: evidence for a substrate-induced transferase active site.
Biochemistry. 1999 Oct 5;38(40):12995-3005
PMID: 10529169
-
Identification of an alternative nucleoside triphosphate: 5'-deoxyadenosylcobinamide phosphate nucleotidyltransferase in Methanobacterium thermoautotrophicum delta H.
J Bacteriol. 2000 Aug;182(15):4227-33
PMID: 10894731
-
Reduction of Cob(III)alamin to Cob(II)alamin in Salmonella enterica serovar typhimurium LT2.
J Bacteriol. 2000 Aug;182(15):4304-9
PMID: 10894741
-
Analysis of the adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (CobU) enzyme of Salmonella typhimurium LT2. Identification of residue His-46 as the site of guanylylation.
J Biol Chem. 2000 Sep 8;275(36):27576-86
PMID: 10869342
-
Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis.
Nucleic Acids Res. 2000 Nov 1;28(21):4317-31
PMID: 11058132
-
The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.
J Mol Microbiol Biotechnol. 2002 Jul;4(4):453-61
PMID: 12125824