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PMID: 15123826 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

DNA end joining becomes less efficient and more error-prone during cellular senescence.

Seluanov A, Mittelman D, Pereira-Smith OM, Wilson JH, Gorbunova V

Abstract

Accumulation of somatic mutations is thought to contribute to the aging process. Genomic instability has been shown to increase during aging, suggesting an aberrant function of DNA double-strand break (DSB) repair. Surprisingly, DSB repair has not been examined with respect to cellular senescence. Therefore, we have studied the ability of young, presenescent, and senescent normal human fibroblasts to repair DSBs in transfected DNA by using a fluorescent reporter substrate. We have found that the efficiency of end joining is reduced up to 4.5 fold in presenescent and senescent cells, relative to young cells. Sequence analysis of end junctions showed that the frequency of precise ligation was higher in young cells, whereas end joining in old cells was associated with extended deletions. These results indicate that end joining becomes inefficient and more error-prone during cellular senescence. Furthermore, the ability to use microhomologies for end joining was compromised in senescent cells, suggesting that young and senescent cells may use different end joining pathways. We hypothesize that inefficient and aberrant end joining is a likely mechanism underlying the age-related genomic instability and higher incidence of cancer in the elderly.

MeSH Terms
Cellular Senescence/physiology DNA/metabolism DNA Repair/physiology Flow Cytometry Genes, Reporter Genomic Instability/physiology Humans Mutation/physiology Sequence Deletion/physiology
Chemicals
DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Seluanov Andrei
Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Mittelman David
Pereira-Smith Olivia M
Wilson John H
Gorbunova Vera
References (65)
65 references, click to expand
  1. Homologous recombination resolution defect in werner syndrome.
    Mol Cell Biol. 2002 Oct;22(20):6971-8 PMID: 12242278
  2. Chromosome aberrations in liver cells in relation to the somatic mutation theory of aging.
    Radiat Res. 1963 Jun;19:337-44 PMID: 14024358
  3. Functional characterization of global genomic DNA repair and its implications for cancer.
    Mutat Res. 2003 Nov;544(2-3):107-14 PMID: 14644313
  4. The clonal evolution of tumor cell populations.
    Science. 1976 Oct 1;194(4260):23-8 PMID: 959840
  5. Mechanisms of nonhomologous recombination in mammalian cells.
    Mol Cell Biol. 1985 Oct;5(10):2599-607 PMID: 3016509
  6. Age-dependent decline in rejoining of X-ray-induced DNA double-strand breaks in normal human lymphocytes.
    Mutat Res. 1989 Mar;219(2):95-100 PMID: 2927420
  7. Mutator phenotype of Werner syndrome is characterized by extensive deletions.
    Proc Natl Acad Sci U S A. 1989 Aug;86(15):5893-7 PMID: 2762303
  8. Joining of linear plasmid DNA is reduced and error-prone in Bloom's syndrome cells.
    EMBO J. 1989 May;8(5):1419-25 PMID: 2767047
  9. DNA damage and repair with age in individual human lymphocytes.
    Mutat Res. 1990 May-Jul;237(3-4):123-30 PMID: 2233818
  10. A role for both RB and p53 in the regulation of human cellular senescence.
    Exp Cell Res. 1991 Sep;196(1):33-9 PMID: 1652450
  11. Spectra of spontaneous and mutagen-induced mutations in the lacI gene in transgenic mice.
    Proc Natl Acad Sci U S A. 1991 Sep 15;88(18):7958-62 PMID: 1832771
  12. Abnormal processing of transfected plasmid DNA in cells from patients with ataxia telangiectasia.
    Mutat Res. 1992 Nov;293(1):47-54 PMID: 1383810
  13. Apoptosis in the pathogenesis and treatment of disease.
    Science. 1995 Mar 10;267(5203):1456-62 PMID: 7878464
  14. A biomarker that identifies senescent human cells in culture and in aging skin in vivo.
    Proc Natl Acad Sci U S A. 1995 Sep 26;92(20):9363-7 PMID: 7568133
  15. The effects of age and lifestyle factors on the accumulation of cytogenetic damage as measured by chromosome painting.
    Mutat Res. 1995 Oct;338(1-6):95-106 PMID: 7565886
  16. Telomere length and replicative aging in human vascular tissues.
    Proc Natl Acad Sci U S A. 1995 Nov 21;92(24):11190-4 PMID: 7479963
  17. Ku80-deficient cells exhibit excess degradation of extrachromosomal DNA.
    J Biol Chem. 1996 Jun 14;271(24):14405-11 PMID: 8662903
  18. Mutations in two Ku homologs define a DNA end-joining repair pathway in Saccharomyces cerevisiae.
    Mol Cell Biol. 1996 Aug;16(8):4189-98 PMID: 8754818
  19. Identification of a Saccharomyces cerevisiae Ku80 homologue: roles in DNA double strand break rejoining and in telomeric maintenance.
    Nucleic Acids Res. 1996 Dec 1;24(23):4639-48 PMID: 8972848
  20. p53, the cellular gatekeeper for growth and division.
    Cell. 1997 Feb 7;88(3):323-31 PMID: 9039259
  21. Human p53 binds Holliday junctions strongly and facilitates their cleavage.
    J Biol Chem. 1997 Mar 14;272(11):7532-9 PMID: 9054458
  22. Disruption of mouse ERCC1 results in a novel repair syndrome with growth failure, nuclear abnormalities and senescence.
    Curr Biol. 1997 Jun 1;7(6):427-39 PMID: 9197240
  23. Transgenic mouse models for studying mutations in vivo: applications in aging research.
    Mech Ageing Dev. 1997 Dec;98(3):189-202 PMID: 9352489
  24. Elevated recombination in immortal human cells is mediated by HsRAD51 recombinase.
    Mol Cell Biol. 1997 Dec;17(12):7151-8 PMID: 9372947
  25. Effect of age on the formation and repair of UV photoproducts in human skin in situ.
    Mutat Res. 2000 Apr 28;459(3):195-202 PMID: 10812331
  26. DNA double-strand break repair in cell-free extracts from Ku80-deficient cells: implications for Ku serving as an alignment factor in non-homologous DNA end joining.
    Nucleic Acids Res. 2000 Jul 1;28(13):2585-96 PMID: 10871410
  27. Expression of senescence-associated beta-galactosidase in enlarged prostates from men with benign prostatic hyperplasia.
    Urology. 2000 Jul;56(1):160-6 PMID: 10869659
  28. Through a glass, darkly: reflections of mutation from lacI transgenic mice.
    Genetics. 2000 Jul;155(3):1359-67 PMID: 10880494
  29. Telomere-binding protein TRF2 binds to and stimulates the Werner and Bloom syndrome helicases.
    J Biol Chem. 2002 Oct 25;277(43):41110-9 PMID: 12181313
  30. Impact of DNA ligase IV on the fidelity of end joining in human cells.
    Nucleic Acids Res. 2003 Apr 15;31(8):2157-67 PMID: 12682366
  31. Comparative levels of DNA breaks and sensitivity to oxidative stress in aged and senescent human fibroblasts: a distinctive pattern for centenarians.
    Biogerontology. 2003;4(2):97-104 PMID: 12766534
  32. Werner syndrome and the function of the Werner protein; what they can teach us about the molecular aging process.
    Carcinogenesis. 2003 May;24(5):791-802 PMID: 12771022
  33. Biochemical evidence for Ku-independent backup pathways of NHEJ.
    Nucleic Acids Res. 2003 Sep 15;31(18):5377-88 PMID: 12954774
  34. An age-induced switch to a hyper-recombinational state.
    Science. 2003 Sep 26;301(5641):1908-11 PMID: 14512629
  35. Yeast Rad52 and Rad51 recombination proteins define a second pathway of DNA damage assessment in response to a single double-strand break.
    Mol Cell Biol. 2003 Dec;23(23):8913-23 PMID: 14612428
  36. The age of cancer.
    Nature. 2000 Nov 9;408(6809):248-54 PMID: 11089982
  37. Tubular cell senescence and expression of TGF-beta1 and p21(WAF1/CIP1) in tubulointerstitial fibrosis of aging rats.
    Exp Mol Pathol. 2001 Feb;70(1):43-53 PMID: 11170790
  38. Differential expression of thymosin beta-10 by early passage and senescent vascular endothelium is modulated by VPF/VEGF: evidence for senescent endothelial cells in vivo at sites of atherosclerosis.
    FASEB J. 2001 Feb;15(2):458-66 PMID: 11156961
  39. Deficient DNA end joining activity in extracts from fanconi anemia fibroblasts.
    J Biol Chem. 2001 Mar 23;276(12):9543-9 PMID: 11124945
  40. A role for p53 in DNA end rejoining by human cell extracts.
    Mutat Res. 1997 Oct;385(1):21-9 PMID: 9372845
  41. Fanconi anemia C gene product plays a role in the fidelity of blunt DNA end-joining.
    J Mol Biol. 1998 Jun 5;279(2):375-85 PMID: 9642044
  42. Double-strand break repair in Ku86- and XRCC4-deficient cells.
    Nucleic Acids Res. 1998 Dec 1;26(23):5333-42 PMID: 9826756
  43. A critical role for DNA end-joining proteins in both lymphogenesis and neurogenesis.
    Cell. 1998 Dec 23;95(7):891-902 PMID: 9875844
  44. Targeted disruption of the gene encoding DNA ligase IV leads to lethality in embryonic mice.
    Curr Biol. 1998 Dec 17-31;8(25):1395-8 PMID: 9889105
  45. Frequency of spontaneous chromosome aberrations in mice: effects of age.
    Mutat Res. 1999 Mar 10;425(1):135-41 PMID: 10082924
  46. Cellular proliferation potential during aging and caloric restriction in rhesus monkeys (Macaca mulatta).
    J Cell Physiol. 1999 Jul;180(1):123-30 PMID: 10362025
  47. p53 directly enhances rejoining of DNA double-strand breaks with cohesive ends in gamma-irradiated mouse fibroblasts.
    Cancer Res. 1999 Jun 1;59(11):2562-5 PMID: 10363973
  48. Deletion of Ku86 causes early onset of senescence in mice.
    Proc Natl Acad Sci U S A. 1999 Sep 14;96(19):10770-5 PMID: 10485901
  49. Neuronal cell death in nervous system development, disease, and injury (Review).
    Int J Mol Med. 2001 May;7(5):455-78 PMID: 11295106
  50. Regulation of cellular senescence by p53.
    Eur J Biochem. 2001 May;268(10):2784-91 PMID: 11358493
  51. Werner syndrome protein is regulated and phosphorylated by DNA-dependent protein kinase.
    J Biol Chem. 2001 Oct 12;276(41):38242-8 PMID: 11477099
  52. Senescent fibroblasts promote epithelial cell growth and tumorigenesis: a link between cancer and aging.
    Proc Natl Acad Sci U S A. 2001 Oct 9;98(21):12072-7 PMID: 11593017
  53. DNA polymerase-beta may be the main player for defective DNA repair in aging rat neurons.
    Ann N Y Acad Sci. 2001 Apr;928:113-20 PMID: 11795502
  54. Ku86 is essential in human somatic cells.
    Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):832-7 PMID: 11792868
  55. Lack of WRN results in extensive deletion at nonhomologous joining ends.
    Cancer Res. 2002 Jan 15;62(2):547-51 PMID: 11809708
  56. A single mutated BRCA1 allele leads to impaired fidelity of double strand break end-joining.
    Oncogene. 2002 Feb 21;21(9):1401-10 PMID: 11857083
  57. DNA double-strand breaks in mouse kidney cells with age.
    Biogerontology. 2001;2(4):261-70 PMID: 11868901
  58. Base excision repair is limited by different proteins in male germ cell nuclear extracts prepared from young and old mice.
    Mol Cell Biol. 2002 Apr;22(7):2410-8 PMID: 11884623
  59. Attenuation of DNA polymerase beta-dependent base excision repair and increased DMS-induced mutagenicity in aged mice.
    Mutat Res. 2002 Mar 20;500(1-2):135-45 PMID: 11890943
  60. p53 and recombination intermediates: role of tetramerization at DNA junctions in complex formation and exonucleolytic degradation.
    Oncogene. 2002 Mar 28;21(14):2130-40 PMID: 11948396
  61. Effect of wild-type, S15D and R175H p53 proteins on DNA end joining in vitro: potential mechanism of DNA double-strand break repair modulation.
    Carcinogenesis. 2002 Apr;23(4):549-57 PMID: 11960905
  62. Sensing and repairing DNA double-strand breaks.
    Carcinogenesis. 2002 May;23(5):687-96 PMID: 12016139
  63. The BLM helicase is necessary for normal DNA double-strand break repair.
    Cancer Res. 2002 May 15;62(10):2766-70 PMID: 12019152
  64. Large genome rearrangements as a primary cause of aging.
    Mech Ageing Dev. 2002 Apr 30;123(8):907-15 PMID: 12044939
  65. The processing of Holliday junctions by BLM and WRN helicases is regulated by p53.
    J Biol Chem. 2002 Aug 30;277(35):31980-7 PMID: 12080066
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2004-05-18
Epub
2004-00-28
Pages
7624-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC419656
Subset
IM
Grants
NEI NIH HHS · R01 EY011731 · United States
NIGMS NIH HHS · R01 GM038219 · United States
NEI NIH HHS · EY11731 · United States
NIGMS NIH HHS · GM38219 · United States
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