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PMID: 15168325 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Age-related maculopathy: a genomewide scan with continued evidence of susceptibility loci within the 1q31, 10q26, and 17q25 regions.

American journal of human genetics ·Vol. 75 ·No. 2 ·2004-08-00 ·Pages 174-89

Weeks DE, Conley YP, Tsai HJ, Mah TS, Schmidt S, Postel EA, Agarwal A, Haines JL, Pericak-Vance MA, Rosenfeld PJ, Paul TO, Eller AW, Morse LS, Dailey JP, Ferrell RE, Gorin MB

Abstract

Age-related maculopathy (ARM), or age-related macular degeneration, is one of the most common causes of visual impairment in the elderly population of developed nations. In a combined analysis of two previous genomewide scans that included 391 families, containing up to 452 affected sib pairs, we found linkage evidence in four regions: 1q31, 9p13, 10q26, and 17q25. We now have added a third set of families and have performed an integrated analysis incorporating 530 families and up to 736 affected sib pairs. Under three diagnostic models, we have conducted linkage analyses using parametric (heterogeneity LOD [HLOD] scores under an autosomal dominant model) and nonparametric (Sall statistic) methods. There is ongoing evidence of susceptibility loci within the 1q31, 10q26, and 17q25 regions. If we treat the third set of families as a replication set, then two regions (10q26 and 17q25) are replicated, with LOD scores >1.0. If we pool all our data together, then four regions (1q31, 2q14.3, 10q26, and 17q25) show HLOD or Sall scores > or =2.0. Within the 1q31 region, we observed an HLOD of 2.72 (genomewide P=.061) under our least stringent diagnostic model, whereas the 17q25 region contained a maximal HLOD of 3.53 (genomewide P=.007) under our intermediate diagnostic model. We have evaluated our results with respect to the findings from several new independent genomewide linkage studies and also have completed ordered subset analyses (OSAs) with apolipoprotein E alleles, smoking history, and age at onset as stratifying covariates. The OSAs generate the interesting hypothesis that the effect of smoking on the risk of ARM is accentuated by a gene in the 10q26 region--a region implicated by four other studies.

MeSH Terms
Chromosomes, Human, Pair 1 Chromosomes, Human, Pair 10 Chromosomes, Human, Pair 17 Gene Frequency Genetic Linkage Genetic Predisposition to Disease Genotype Humans Lod Score Macular Degeneration/genetics,physiopathology
Authors & Affiliations
16 authors, click to expand affiliations / ORCID
Weeks Daniel E
Department of Human Genetics, University of Pittsburgh Graduate School of Public Health, Pittsburgh, PA, USA.
Conley Yvette P
Tsai Hui-Ju
Mah Tammy S
Schmidt Silke
Postel Eric A
Agarwal Anita
Haines Jonathan L
Pericak-Vance Margaret A
Rosenfeld Philip J
Paul T Otis
Eller Andrew W
Morse Lawrence S
Dailey J P
Ferrell Robert E
Gorin Michael B
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Article Info
Journal
American journal of human genetics
Abbr.
Am J Hum Genet
ISSN
0002-9297
Published
2004-08-00
Epub
2004-00-27
Pages
174-89
Language
English
Region
United States
NLM ID
0370475
PMCID
PMC1216053
Subset
IM
Grants
NHGRI NIH HHS · N01HG65403 · United States
NEI NIH HHS · R01 EY009859 · United States
NHGRI NIH HHS · N01-HG-48141 · United States
NEI NIH HHS · R01-EY09859 · United States
NHLBI NIH HHS · N01HV48141 · United States
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