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PMID: 15211038 Published · ppublish English Comparative Study Evaluation Study Journal Article Research Support, U.S. Gov't, P.H.S.

Protein Data Bank depositions from synchrotron sources.

Journal of synchrotron radiation ·Vol. 11 ·No. Pt 4 ·2004-07-01 ·Pages 319-27

Jiang J, Sweet RM

Abstract

A survey and analysis of Protein Data Bank (PDB) depositions from international synchrotron radiation facilities, based on the latest released PDB entries, are reported. The results (http://asdp.bnl.gov/asda/Libraries/) show that worldwide, every year since 1999, more than 50% of the deposited X-ray structures have used synchrotron facilities, reaching 75% by 2003. In this web-based database, all PDB entries among individual synchrotron beamlines are archived, synchronized with the weekly PDB release. Statistics regarding the quality of experimental data and the refined model for all structures are presented, and these are analysed to reflect the impact of synchrotron sources. The results confirm the common impression that synchrotron sources extend the size of structures that can be solved with equivalent or better quality than home sources.

MeSH Terms
Crystallography, X-Ray/methods,statistics & numerical data,trends Databases, Protein/statistics & numerical data,trends Information Storage and Retrieval/statistics & numerical data,trends Internationality Protein Conformation Proteins/analysis,chemistry,classification Synchrotrons/statistics & numerical data
Chemicals
Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Jiang Jiansheng
Biology Department, Brookhaven National Laboratory, USA. [email protected]
Sweet Robert M
Article Info
Journal
Journal of synchrotron radiation
Abbr.
J Synchrotron Radiat
ISSN
0909-0495
Published
2004-07-01
Epub
2004-00-23
Pages
319-27
Language
English
Region
United States
NLM ID
9888878
Subset
IM
Grants
NCRR NIH HHS · P41-RR12408 · United States
NIGMS NIH HHS · P50-GM62529 · United States
Analysis Services
Analysis Services

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