Home LiteratureArticle Details
PMID: 15299888 Published · ppublish English Journal Article

Bayesian correlated MAD phasing.

Acta crystallographica. Section D, Biological crystallography ·Vol. 53 ·No. Pt 5 ·1997-09-01 ·Pages 571-9

Terwilliger TC, Berendzen J

Abstract

A Bayesian treatment for phase calculation in the multiwavelength anomalous diffraction (MAD) technique is presented. This approach explicitly treats effects of errors correlated among measurements at different wavelengths and between Bijvoet pairs. The resulting method, which is called Bayesian correlated MAD phasing, gives proper statistical consideration to all data and does not give special treatment to data from a particular wavelength. Results obtained using Bayesian correlated MAD phasing and two other strategies on both a model test case and on data obtained in two actual MAD experiments are compared. Although all procedures performed well when the completeness of the data was high, it is shown that Bayesian correlated MAD phasing is more robust with respect to incompleteness of data than the other methods are. At 60% completeness the improvement over other methods for the examples given was nearly 50% in the correlation coefficients, and made a substantial difference in the interpretability of an electron-density map.

Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Terwilliger T C
Structural Biology Group, Los Alamos National Laboratory, NM 87545, USA. [email protected]
Berendzen J
Article Info
Journal
Acta crystallographica. Section D, Biological crystallography
Abbr.
Acta Crystallogr D Biol Crystallogr
ISSN
0907-4449
Published
1997-09-01
Pages
571-9
Language
English
Region
United States
NLM ID
9305878
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]