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PMID: 15342798 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Adaptive evolution drives the diversification of zinc-finger binding domains.

Molecular biology and evolution ·Vol. 21 ·No. 12 ·2004-12-00 ·Pages 2326-39

Schmidt D, Durrett R

Abstract

The human genome is estimated to contain 700 zinc-finger genes, which perform many key functions, including regulating transcription. The dramatic increase in the number of these genes as we move from yeast to C. elegans to Drosophila and to humans, as well as the clustered organization of these genes in humans, suggests that gene duplication has played an important role in expanding this family of genes. Using likelihood methods developed by Yang and parsimony methods introduced by Suzuki and Gojobori, we have investigated four clusters of zinc-finger genes on human chromosome 19 and found evidence that positive selection was involved in diversifying the family of zinc-finger binding motifs.

MeSH Terms
Adaptation, Biological/genetics Amino Acid Sequence Animals Binding Sites/genetics Chromosomes, Human, Pair 19/genetics Evolution, Molecular Gene Duplication Genome, Human Genomics Humans Likelihood Functions Mice/genetics Models, Genetic Phylogeny Rats/genetics Selection, Genetic Zinc Fingers/genetics
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Schmidt Deena
Center for Applied Mathematics and Department of Mathematics, Cornell University, Ithaca, New York, USA.
Durrett Rick
Article Info
Journal
Molecular biology and evolution
Abbr.
Mol Biol Evol
ISSN
0737-4038
Published
2004-12-00
Epub
2004-00-01
Pages
2326-39
Language
English
Region
United States
NLM ID
8501455
Subset
IM
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