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PMID: 15356622 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The ring of life provides evidence for a genome fusion origin of eukaryotes.

Nature ·Vol. 431 ·No. 7005 ·2004-09-09 ·Pages 152-5

Rivera MC, Lake JA

Abstract

Genomes hold within them the record of the evolution of life on Earth. But genome fusions and horizontal gene transfer seem to have obscured sufficiently the gene sequence record such that it is difficult to reconstruct the phylogenetic tree of life. Here we determine the general outline of the tree using complete genome data from representative prokaryotes and eukaryotes and a new genome analysis method that makes it possible to reconstruct ancient genome fusions and phylogenetic trees. Our analyses indicate that the eukaryotic genome resulted from a fusion of two diverse prokaryotic genomes, and therefore at the deepest levels linking prokaryotes and eukaryotes, the tree of life is actually a ring of life. One fusion partner branches from deep within an ancient photosynthetic clade, and the other is related to the archaeal prokaryotes. The eubacterial organism is either a proteobacterium, or a member of a larger photosynthetic clade that includes the Cyanobacteria and the Proteobacteria.

MeSH Terms
Bacteria/genetics DNA, Bacterial/genetics DNA, Fungal/genetics DNA, Mitochondrial/genetics Eukaryotic Cells/metabolism Evolution, Molecular Gene Transfer, Horizontal Genome Genomics/methods Models, Genetic Organelles/genetics Photosynthesis Phylogeny Prokaryotic Cells/metabolism Recombination, Genetic/genetics Saccharomyces cerevisiae/genetics Schizosaccharomyces/genetics
Chemicals
DNA, Bacterial DNA, Fungal DNA, Mitochondrial
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Rivera Maria C
Molecular Biology Institute, MCD Biology, University of California, Los Angeles 90095, USA.
Lake James A
Article Info
Journal
Nature
Abbr.
Nature
ISSN
1476-4687
Published
2004-09-09
Pages
152-5
Language
English
Region
England
NLM ID
0410462
Subset
IM
Corrections
CommentIn
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