Home LiteratureArticle Details
PMID: 15476823 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module.

Journal of molecular biology ·Vol. 343 ·No. 4 ·2004-10-29 ·Pages 1081-93

Legge GB, Martinez-Yamout MA, Hambly DM, Trinh T, Lee BM, Dyson HJ, Wright PE

Abstract

CREB-binding protein (CBP) is a large, multi-domain protein that provides a multitude of binding sites for transcriptional coactivators. The site of interaction of the tumor suppressor p53 and the oncoprotein E1A with CBP/p300 has been identified with the third cysteine-histidine-rich (CH3) domain, which incorporates two zinc-binding motifs, ZZ and TAZ2. We show that these two domains fold independently and do not interact in solution. Our experiments demonstrate conclusively that the interaction of p53 and E1A with the CH3 domain resides exclusively in the TAZ2 domain, with no contribution from the ZZ domain. We report also the three-dimensional solution structure of the ZZ domain of murine CBP. The 52 residue ZZ domain contains two twisted antiparallel beta-sheets and a short alpha-helix, and binds two zinc ions. The identity of the zinc coordinating ligands was resolved unambiguously using NMR spectroscopy of the ZZ domain substituted with (113)Cd. One zinc ion is coordinated tetrahedrally via two CXXC motifs to four cysteine side-chains, and the second zinc ion is coordinated tetrahedrally by a third CXXC motif, together with an unusual HXH motif coordinating via the N(epsilon2) atom of His40 and the N(delta1) atom of His-42. The first zinc cluster of the ZZ domain is strictly conserved, whereas the second zinc cluster shows variability in the position of the two histidine residues, reflecting the wide variety of molecules that incorporate ZZ domains. The structure of the ZZ domain shows that it belongs to the family of cross-brace zinc finger motifs that include the PHD, RING, and FYVE domains; however, its biological function is unclear. Mapping of the positions of conserved residues onto the calculated structures reveals a face containing exposed aromatic and hydrophobic side-chains, while the opposite face contains a series of conserved charged or hydrophilic groups. These homologies suggest that the ZZ domain is involved in ligand binding or molecular scaffolding, with specificity provided by the variability of the sequence that contains the helix in the murine CPB ZZ domain structure.

MeSH Terms
Amino Acid Sequence Animals CREB-Binding Protein Cadmium/metabolism Dystrophin/chemistry,metabolism Isotopes/metabolism Magnetic Resonance Spectroscopy Mice Molecular Sequence Data Nuclear Proteins/chemistry Protein Structure, Tertiary Trans-Activators/chemistry Tumor Suppressor Protein p53/metabolism Zinc/metabolism Zinc Fingers/physiology
Chemicals
Dystrophin Isotopes Nuclear Proteins Trans-Activators Tumor Suppressor Protein p53 Cadmium CREB-Binding Protein Crebbp protein, mouse Zinc
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Legge Glen B
Department of Molecular Biology and Skaggs Institute of Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Martinez-Yamout Maria A
Hambly David M
Trinh Tam
Lee Brian M
Dyson H Jane
Wright Peter E
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
2004-10-29
Pages
1081-93
Language
English
Region
England
NLM ID
2985088R
Subset
IM
Grants
NCI NIH HHS · CA96865 · United States
Databases
PDB
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]